BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZG09RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 1622 0.0 >3x_Contig1791 Length = 39945 Score = 1622 bits (818), Expect = 0.0 Identities = 876/892 (98%), Gaps = 3/892 (0%) Strand = Plus / Minus Query: 47 tgaatgaattcaaagcaggaaaatgtaacttacttttagctactgatgtggcagccagag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6318 tgaatgaattcaaagcaggaaaatgtaacttacttttagctactgatgtggcagccagag 6259 Query: 107 gtttagacatcccaaacgtgaaaaccgttatcaatttgactttccctctaacagtagaag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6258 gtttagacatcccaaacgtgaaaaccgttatcaatttgactttccctctaacagtagaag 6199 Query: 167 attacgttcacagaattggtagaaccggtcgtgctggtcaatacggtaccgcacacacat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6198 attacgttcacagaattggtagaaccggtcgtgctggtcaatacggtaccgcacacacat 6139 Query: 227 tgttcactgagcaagaaaagcatcttgcaggtgcccttgttaatgtcttaaatggtgctg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6138 tgttcactgagcaagaaaagcatcttgcaggtgcccttgttaatgtcttaaatggtgctg 6079 Query: 287 gtcaacctgttcctgaggagctcaagaagttcggtactcacacaaagaagaaggaacata 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6078 gtcaacctgttcctgaggagctcaagaagttcggtactcacacaaagaagaaggaacata 6019 Query: 347 gtgcgtacggtgcattcttcaaggatgtggacctatcaaagaaaccaaaaaagattacat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6018 gtgcgtacggtgcattcttcaaggatgtggacctatcaaagaaaccaaaaaagattacat 5959 Query: 407 ttgattaatttaaatccgttataaagacaattcttgtattttttagcaatcacccccatt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5958 ttgattaatttaaatccgttataaagacaattcttgtattttttagcaatcacccccatt 5899 Query: 467 atgtacagtagttcattcaatacagagtaaataaaagtttacaattactcttgcatcgaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5898 atgtacagtagttcattcaatacagagtaaataaaagtttacaattactcttgcatcgaa 5839 Query: 527 gtttgtacaatgaatgttcacgataaaaattgaaattaaagacgtattaaatatgcgata 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5838 gtttgtacaatgaatgttcacgataaaaattgaaattaaagacgtattaaatatgcgata 5779 Query: 587 ttcaaacaatgactttgaaaggcaacgaagaatggtgttgaaagggaaagcattaaagta 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5778 ttcaaacaatgactttgaaaggcaacgaagaatggtgttgaaagggaaagcattaaagta 5719 Query: 647 taaaaggggatactctatcgaagatcttcttgtaccttcgccttttattttacagtatta 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5718 taaaaggggatactctatcgaagatcttcttgtaccttcgccttttattttacagtatta 5659 Query: 707 gtacaatggagcagtgcataatttttgaaatacaactgaagtgataaacaaaaggaaatt 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5658 gtacaatggagcagtgcataatttttgaaatacaactgaagtgataaacaaaaggaaatt 5599 Query: 767 gagaatctaanagaacatcgagtaccatctacngtgaagagtttgcatcagttgagtgta 826 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5598 gagaatctaaaagaacatcgagtaccatctacggtgaagagtttgcatcagttgagtgta 5539 Query: 827 ttggcgcatttcacccca-cagt-tcttaccaagttacacccagccatatggacaacgaa 884 |||||||||||||||||| |||| ||| | ||||||||||||||||||| ||||||||| Sbjct: 5538 ttggcgcatttcaccccagcagtctctaccaaagttacacccagccatattgacaacgaa 5479 Query: 885 ggcatgttctttttcgtttaagaataagcgcaggtcatactttgaaatctgc 936 | ||||||| |||||||| |||| |||||| ||||||| ||||||||||| Sbjct: 5478 gtcatgttccttttcgttatagaaatagcgcaagtcatac-ttgaaatctgc 5428 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7498 Number of Sequences: 1807 Number of extensions: 7498 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)