BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZG10RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1761 1253 0.0 >3x_Contig1761 Length = 23186 Score = 1253 bits (632), Expect = 0.0 Identities = 662/668 (99%), Gaps = 3/668 (0%) Strand = Plus / Minus Query: 47 ttctaatcatgtttatacgcgattagatatactactcatctgctttcatcatcttcattt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6167 ttctaatcatgtttatacgcgattagatatactactcatctgctttcatcatcttcattt 6108 Query: 107 tccaatcttttaaagatcagaaaagtgtgaaatattctaaaagtcacgtgaagaagaatt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6107 tccaatcttttaaagatcagaaaagtgtgaaatattctaaaagtcacgtgaagaagaatt 6048 Query: 167 tggaactccgacgttgtggggatattaatatgtacaaggttacgtagatctgagtattga 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6047 tggaactccgacgttgtggggatattaatatgtacaaggttacgtagatctgagtattga 5988 Query: 227 ttgttttatgagaatgatcatctaggtcgtaattgaatcatgtgaaggttgttcagatag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5987 ttgttttatgagaatgatcatctaggtcgtaattgaatcatgtgaaggttgttcagatag 5928 Query: 287 tttcttcataggagaaaaagtgaaagtaatttaaatatggagttggttgaaatcaagcag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5927 tttcttcataggagaaaaagtgaaagtaatttaaatatggagttggttgaaatcaagcag 5868 Query: 347 agtaatataccttcttgacatccacaattttcttacctctacctagagcaatttcatcta 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5867 agtaatataccttcttgacatccacaattttcttacctctacctagagcaatttcatcta 5808 Query: 407 tagatttttgagacttggtgatagcgtctatagtacccttggctatgttcatgatatttc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5807 tagatttttgagacttggtgatagcgtctatagtacccttggctatgttcatgatatttc 5748 Query: 467 tactcttgtaaacttttgcacttaaatctttgataccagcacattcacaaatttcataaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5747 tactcttgtaaacttttgcacttaaatctttgataccagcacattcacaaatttcataaa 5688 Query: 527 ttacgtgattgactcttagaccgaaacctggcttagcagctctcaagaatagtttcacac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5687 ttacgtgattgactcttagaccgaaacctggcttagcagctctcaagaatagtttcacac 5628 Query: 587 cgtggtatctatagtctatgtctt-aaaaatagttcttttttc-aatctaggcacttctt 644 |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 5627 cgtggtatctatagtctatgtcttcaaaaatagttcttttttcaaatctaggcacttctt 5568 Query: 645 tttagttcctcactgcatccc-atgagctttcttgatggaatctgccatattttcacggg 703 || |||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 5567 ttaagttcctcactgcatcccaatgagctttcttgatggattctgccatatcttcacggg 5508 Query: 704 atttaccc 711 |||||||| Sbjct: 5507 atttaccc 5500 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7915 Number of Sequences: 1807 Number of extensions: 7915 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)