BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZH02RM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig925 1568 0.0 >3x_Contig925 Length = 3823 Score = 1568 bits (791), Expect = 0.0 Identities = 835/843 (99%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 48 tagtgattctttaaaagatttttttttcatgttgagcatagtagtctgtaagtatgtatg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1948 tagtgattctttaaaagatttttttttcatgttgagcatagtagtctgtaagtatgtatg 2007 Query: 108 attaagtaagatatgggaaggtaaaccatttttaactaattgaatggcactggctcctgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2008 attaagtaagatatgggaaggtaaaccatttttaactaattgaatggcactggctcctgg 2067 Query: 168 tcgtgccttgtttctatttacatgtttatcgtggttaagagcgagagtattagtttgcga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2068 tcgtgccttgtttctatttacatgtttatcgtggttaagagcgagagtattagtttgcga 2127 Query: 228 atttttgtaggattagcgatactagtttcgggtatataatgtcactagtgttaccggaaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2128 atttttgtaggattagcgatactagtttcgggtatataatgtcactagtgttaccggaaa 2187 Query: 288 tggttgacagaataccttgcttcaagtaatgttccttcaatggggtcactgtcttgttgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2188 tggttgacagaataccttgcttcaagtaatgttccttcaatggggtcactgtcttgttgt 2247 Query: 348 actgttctagcctcttgccaaacacctctgcagtatcgtcgggtctcttggtcaaaggtt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2248 actgttctagcctcttgccaaacacctctgcagtatcgtcgggtctcttggtcaaaggtt 2307 Query: 408 caccggtgatatcgtcctttccgtcgactttgggagggttatattgcaaattataaactc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2308 caccggtgatatcgtcctttccgtcgactttgggagggttatattgcaaattataaactc 2367 Query: 468 ttccacttggaacgtgaacgtaacggttttcgattctctccaagatcacttcatgaggca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2368 ttccacttggaacgtgaacgtaacggttttcgattctctccaagatcacttcatgaggca 2427 Query: 528 cgtctagctccacgacaaggtttaatgaggcatcgtgttccaacaatgacttgtctaaca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2428 cgtctagctccacgacaaggtttaatgaggcatcgtgttccaacaatgacttgtctaaca 2487 Query: 588 cttcagcttgacccacggtacgtgggaacccatctagtaaccaagtagcatttggattta 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2488 cttcagcttgacccacggtacgtgggaacccatctagtaaccaagtagcatttggattta 2547 Query: 648 accagccacgtgacttcaattcgtcacacacaactccggtgatcaaatcatcgggtaaca 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2548 accagccacgtgacttcaattcgtcacacacaactccggtgatcaaatcatcgggtaaca 2607 Query: 708 actggcctttctcaatatacgaggaggcacttaaacctaacggtgtgccatgttcaatct 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2608 actggcctttctcaatatacgaggaggcacttaaacctaacggtgtgccatgttcaatct 2667 Query: 768 gtttacgtagcaaatcttcagatgagaatagccttgatggatccgaattctttcaacnag 827 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || Sbjct: 2668 gtttacgtagcaaatctccagatgag-atagccttgatggatccgaattctttcaac-ag 2725 Query: 828 tttcgaggtctgagtaccctttaccagaaaccgggtggcacccattagtaacaatcttta 887 |||||||||||||||| |||||||||| |||||||| ||||||| ||||||||||||| | Sbjct: 2726 tttcgaggtctgagta-cctttaccag-aaccgggt-gcacccagtagtaacaatcttaa 2782 Query: 888 tgg 890 ||| Sbjct: 2783 tgg 2785 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5736 Number of Sequences: 1807 Number of extensions: 5736 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)