BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC47ZH02RM1.SCF screened BAC_end
         (923 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig925                                                         1568   0.0  

>3x_Contig925 
          Length = 3823

 Score = 1568 bits (791), Expect = 0.0
 Identities = 835/843 (99%), Gaps = 5/843 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   tagtgattctttaaaagatttttttttcatgttgagcatagtagtctgtaagtatgtatg 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1948 tagtgattctttaaaagatttttttttcatgttgagcatagtagtctgtaagtatgtatg 2007

                                                                        
Query: 108  attaagtaagatatgggaaggtaaaccatttttaactaattgaatggcactggctcctgg 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 attaagtaagatatgggaaggtaaaccatttttaactaattgaatggcactggctcctgg 2067

                                                                        
Query: 168  tcgtgccttgtttctatttacatgtttatcgtggttaagagcgagagtattagtttgcga 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 tcgtgccttgtttctatttacatgtttatcgtggttaagagcgagagtattagtttgcga 2127

                                                                        
Query: 228  atttttgtaggattagcgatactagtttcgggtatataatgtcactagtgttaccggaaa 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 atttttgtaggattagcgatactagtttcgggtatataatgtcactagtgttaccggaaa 2187

                                                                        
Query: 288  tggttgacagaataccttgcttcaagtaatgttccttcaatggggtcactgtcttgttgt 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 tggttgacagaataccttgcttcaagtaatgttccttcaatggggtcactgtcttgttgt 2247

                                                                        
Query: 348  actgttctagcctcttgccaaacacctctgcagtatcgtcgggtctcttggtcaaaggtt 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 actgttctagcctcttgccaaacacctctgcagtatcgtcgggtctcttggtcaaaggtt 2307

                                                                        
Query: 408  caccggtgatatcgtcctttccgtcgactttgggagggttatattgcaaattataaactc 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 caccggtgatatcgtcctttccgtcgactttgggagggttatattgcaaattataaactc 2367

                                                                        
Query: 468  ttccacttggaacgtgaacgtaacggttttcgattctctccaagatcacttcatgaggca 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2368 ttccacttggaacgtgaacgtaacggttttcgattctctccaagatcacttcatgaggca 2427

                                                                        
Query: 528  cgtctagctccacgacaaggtttaatgaggcatcgtgttccaacaatgacttgtctaaca 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 cgtctagctccacgacaaggtttaatgaggcatcgtgttccaacaatgacttgtctaaca 2487

                                                                        
Query: 588  cttcagcttgacccacggtacgtgggaacccatctagtaaccaagtagcatttggattta 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 cttcagcttgacccacggtacgtgggaacccatctagtaaccaagtagcatttggattta 2547

                                                                        
Query: 648  accagccacgtgacttcaattcgtcacacacaactccggtgatcaaatcatcgggtaaca 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 accagccacgtgacttcaattcgtcacacacaactccggtgatcaaatcatcgggtaaca 2607

                                                                        
Query: 708  actggcctttctcaatatacgaggaggcacttaaacctaacggtgtgccatgttcaatct 767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 actggcctttctcaatatacgaggaggcacttaaacctaacggtgtgccatgttcaatct 2667

                                                                        
Query: 768  gtttacgtagcaaatcttcagatgagaatagccttgatggatccgaattctttcaacnag 827
            ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 2668 gtttacgtagcaaatctccagatgag-atagccttgatggatccgaattctttcaac-ag 2725

                                                                        
Query: 828  tttcgaggtctgagtaccctttaccagaaaccgggtggcacccattagtaacaatcttta 887
            |||||||||||||||| |||||||||| |||||||| ||||||| ||||||||||||| |
Sbjct: 2726 tttcgaggtctgagta-cctttaccag-aaccgggt-gcacccagtagtaacaatcttaa 2782

               
Query: 888  tgg 890
            |||
Sbjct: 2783 tgg 2785


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5736
Number of Sequences: 1807
Number of extensions: 5736
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 923
length of database: 10,358,551
effective HSP length: 16
effective length of query: 907
effective length of database: 10,329,639
effective search space: 9368982573
effective search space used: 9368982573
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)