BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZH03FM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1517 1098 0.0 >3x_Contig1517 Length = 8289 Score = 1098 bits (554), Expect = 0.0 Identities = 653/678 (96%), Gaps = 6/678 (0%) Strand = Plus / Plus Query: 89 tgaatcatctttggacctgctcatgtatggcaattgagctatgttccatactcccccatt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5361 tgaatcatctttggacctgctcatgtatggcaattgagctatgttccatactcccccatt 5420 Query: 149 ttctaatgcttctttcgatactaaacaatccatcactgaatcttatcgcgatagtttgaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5421 ttctaatgcttctttcgatactaaacaatccatcactgaatcttatcgcgatagtttgaa 5480 Query: 209 ttcgacgatttccaataatagcgatgcaaagaaaccgaatgtcatgcttcaaactgccag 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5481 ttcgacgatttccaataatagcgatgcaaagaaaccgaatgtcatgcttcaaactgccag 5540 Query: 269 cacatcggcacctccatcaccagaactaccaatagaatcttcagaatccaatgatgattt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5541 cacatcggcacctccatcaccagaactaccaatagaatcttcagaatccaatgatgattt 5600 Query: 329 gattcccattgctagtatacctgatgaattgatgaaattgattgatttgttcattgatga 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5601 gattcccattgctagtatacctgatgaattgatgaaattgattgatttgttcattgatga 5660 Query: 389 tttgaaacagcctaaatattccaggcctttaatgattacacaattatctcagatattcca 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5661 tttgaaacagcctaaatattccaggcctttaatgattacacaattatctcagatattcca 5720 Query: 449 aaggttttatgagagatttgatagatcttgccaacaacattttaatgcattagcctcgcc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5721 aaggttttatgagagatttgatagatcttgccaacaacattttaatgcattagcctcgcc 5780 Query: 509 tggaagtgtgaatgttatgctcaacgcgagagaaacgagaaatagtggattgagtagtat 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5781 tggaagtgtgaatgttatgctcaacgcgagagaaacgagaaatagtggattgagtagtat 5840 Query: 569 ctttaacagatccagaaatagtagttttcgaatta-ccgctttagaaccagaactagact 627 ||| ||||||||||||| |||||||||||||| || | || | ||||| ||||||||| Sbjct: 5841 cttcaacagatccagaagtagtagttttcgaaatagcagcataagaacaagaactagaac 5900 Query: 628 tatttctgaacagaattttcagcaattgttgacttcagaagaataatcccatcaaattaa 687 || |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 5901 taattctgaacagaattatcagcaattgttgactccagaagaaatatcccatcaaattaa 5960 Query: 688 gctgcaagaaggct-attatttccaaacggaccagattatgggatttgggtggaatgcga 746 |||||||| ||||| || || || |||||||||||||||| ||||||| || |||||||| Sbjct: 5961 gctgcaag-aggctaataatatcaaaacggaccagattat-ggatttgtgt-gaatgcga 6017 Query: 747 aaaatttcaagaaaatac 764 || | ||||||||||||| Sbjct: 6018 aata-ttcaagaaaatac 6034 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8191 Number of Sequences: 1807 Number of extensions: 8191 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)