BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZH09RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1764 1415 0.0 >3x_Contig1764 Length = 22510 Score = 1415 bits (714), Expect = 0.0 Identities = 832/861 (96%), Gaps = 8/861 (0%) Strand = Plus / Minus Query: 49 tagaccaattaggatatcaatcaccatgtggtgtatatggcagttacatctcgttgttta 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11232 tagaccaattaggatatcaatcaccatgtggtgtatatggcagttacatctcgttgttta 11173 Query: 109 tttgtgccattattttgatagtacaattttgggtatcattgtttcctttagaatccaacg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11172 tttgtgccattattttgatagtacaattttgggtatcattgtttcctttagaatccaacg 11113 Query: 169 gtaggctgaatgtcgtctcattccttcaaaattatatggctgttccaattaccatcgtac 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11112 gtaggctgaatgtcgtctcattccttcaaaattatatggctgttccaattaccatcgtac 11053 Query: 229 tttaccttggtcataaagcttacacagggaactggaaaccttttattagagcacctgaga 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11052 tttaccttggtcataaagcttacacagggaactggaaaccttttattagagcacctgaga 10993 Query: 289 ttgacattcagaccgatcgtgacatctactgtgttgatgaggttactggaaaaaaatcag 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10992 ttgacattcagaccgatcgtgacatctactgtgttgatgaggttactggaaaaaaatcag 10933 Query: 349 tttttgttgagcttctggatagcggagacatgtgctcgaaactatctgataaccttgtca 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10932 tttttgttgagcttctggatagcggagacatgtgctcgaaactatctgataaccttgtca 10873 Query: 409 agtagtacaaacatttctacgaaactgaggttctcatacagtatcgactaaaccaaggaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10872 agtagtacaaacatttctacgaaactgaggttctcatacagtatcgactaaaccaaggaa 10813 Query: 469 ctgttgatatgaaattattacgaaaaaatgaatagttttctgtagtaaacaatataataa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10812 ctgttgatatgaaattattacgaaaaaatgaatagttttctgtagtaaacaatataataa 10753 Query: 529 ataatgcaattgaaaaaaaaatttaaactcaacaccgatttctgattatgggaaacccct 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10752 ataatgcaattgaaaaaaaaatttaaactcaacaccgatttctgattatgggaaacccct 10693 Query: 589 catagaagacttatgttatactggtgctgatctcgtttt-aatattagcatcacttaag- 646 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10692 catagaagacttatgttatactggtgctgatctcgttttaaatattagcatcacttaaga 10633 Query: 647 aaccattcttcctttanaatgagtactaaatgtgacactttcatcaatggtctgtcgcaa 706 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10632 aaccattcttcctttaaaatgagtactaaatgtgacactttcatcaatggtctgtcgcaa 10573 Query: 707 gtccgggtaaattgttacgtttctaatgataaaaaaattccgaattcattgaaatagcat 766 ||||||||||| ||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 10572 gtccgggtaaaatgttacgtttctaatgataaaaaaatttcgatatcattg-aatagcat 10514 Query: 767 ccaattcgaataatcttaaacacagcttaccttctgattnttgactgaagagctaaatta 826 |||||||| |||||||||||||||| | || |||||| |||||||||||||||||||| Sbjct: 10513 tcaattcgataaatcttaaacacagctcagctactgatt-ttgactgaagagctaaatta 10455 Query: 827 gttccttatcggcaacttttgtggaccaggtttcaaaactattaacaattccgttgaata 886 ||||| ||||| | ||| |||| ||| ||||| ||||||||| | ||||| |||||||| Sbjct: 10454 gttcc-tatcgtcgactattgt-gacaaggttccaaaactatcagcaatt-cgttgaat- 10399 Query: 887 aaatattacactttttgggtt 907 | ||| | ||||||||||||| Sbjct: 10398 agataattcactttttgggtt 10378 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8114 Number of Sequences: 1807 Number of extensions: 8114 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)