BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC47ZH09RM1.SCF screened BAC_end
         (946 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1764                                                        1415   0.0  

>3x_Contig1764 
          Length = 22510

 Score = 1415 bits (714), Expect = 0.0
 Identities = 832/861 (96%), Gaps = 8/861 (0%)
 Strand = Plus / Minus

                                                                         
Query: 49    tagaccaattaggatatcaatcaccatgtggtgtatatggcagttacatctcgttgttta 108
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11232 tagaccaattaggatatcaatcaccatgtggtgtatatggcagttacatctcgttgttta 11173

                                                                         
Query: 109   tttgtgccattattttgatagtacaattttgggtatcattgtttcctttagaatccaacg 168
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11172 tttgtgccattattttgatagtacaattttgggtatcattgtttcctttagaatccaacg 11113

                                                                         
Query: 169   gtaggctgaatgtcgtctcattccttcaaaattatatggctgttccaattaccatcgtac 228
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11112 gtaggctgaatgtcgtctcattccttcaaaattatatggctgttccaattaccatcgtac 11053

                                                                         
Query: 229   tttaccttggtcataaagcttacacagggaactggaaaccttttattagagcacctgaga 288
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11052 tttaccttggtcataaagcttacacagggaactggaaaccttttattagagcacctgaga 10993

                                                                         
Query: 289   ttgacattcagaccgatcgtgacatctactgtgttgatgaggttactggaaaaaaatcag 348
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10992 ttgacattcagaccgatcgtgacatctactgtgttgatgaggttactggaaaaaaatcag 10933

                                                                         
Query: 349   tttttgttgagcttctggatagcggagacatgtgctcgaaactatctgataaccttgtca 408
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10932 tttttgttgagcttctggatagcggagacatgtgctcgaaactatctgataaccttgtca 10873

                                                                         
Query: 409   agtagtacaaacatttctacgaaactgaggttctcatacagtatcgactaaaccaaggaa 468
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10872 agtagtacaaacatttctacgaaactgaggttctcatacagtatcgactaaaccaaggaa 10813

                                                                         
Query: 469   ctgttgatatgaaattattacgaaaaaatgaatagttttctgtagtaaacaatataataa 528
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10812 ctgttgatatgaaattattacgaaaaaatgaatagttttctgtagtaaacaatataataa 10753

                                                                         
Query: 529   ataatgcaattgaaaaaaaaatttaaactcaacaccgatttctgattatgggaaacccct 588
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10752 ataatgcaattgaaaaaaaaatttaaactcaacaccgatttctgattatgggaaacccct 10693

                                                                         
Query: 589   catagaagacttatgttatactggtgctgatctcgtttt-aatattagcatcacttaag- 646
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 10692 catagaagacttatgttatactggtgctgatctcgttttaaatattagcatcacttaaga 10633

                                                                         
Query: 647   aaccattcttcctttanaatgagtactaaatgtgacactttcatcaatggtctgtcgcaa 706
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10632 aaccattcttcctttaaaatgagtactaaatgtgacactttcatcaatggtctgtcgcaa 10573

                                                                         
Query: 707   gtccgggtaaattgttacgtttctaatgataaaaaaattccgaattcattgaaatagcat 766
             ||||||||||| ||||||||||||||||||||||||||| |||  |||||| ||||||||
Sbjct: 10572 gtccgggtaaaatgttacgtttctaatgataaaaaaatttcgatatcattg-aatagcat 10514

                                                                         
Query: 767   ccaattcgaataatcttaaacacagcttaccttctgattnttgactgaagagctaaatta 826
              ||||||||  |||||||||||||||| | || |||||| ||||||||||||||||||||
Sbjct: 10513 tcaattcgataaatcttaaacacagctcagctactgatt-ttgactgaagagctaaatta 10455

                                                                         
Query: 827   gttccttatcggcaacttttgtggaccaggtttcaaaactattaacaattccgttgaata 886
             ||||| ||||| | ||| |||| ||| ||||| ||||||||| | ||||| |||||||| 
Sbjct: 10454 gttcc-tatcgtcgactattgt-gacaaggttccaaaactatcagcaatt-cgttgaat- 10399

                                  
Query: 887   aaatattacactttttgggtt 907
             | ||| | |||||||||||||
Sbjct: 10398 agataattcactttttgggtt 10378


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8114
Number of Sequences: 1807
Number of extensions: 8114
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)