BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZA07FM1.SCF screened BAC_end
         (906 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1726                                                        1497   0.0  

>3x_Contig1726 
          Length = 20144

 Score = 1497 bits (755), Expect = 0.0
 Identities = 803/817 (98%), Gaps = 2/817 (0%)
 Strand = Plus / Plus

                                                                         
Query: 89    gacttcaagctaattgacaataagctaatacatgtaattaacggtaaaaagctaatttac 148
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11399 gacttcaagctaattgacaataagctaatacatgtaattaacggtaaaaagctaatttac 11458

                                                                         
Query: 149   tgtgctggtgaaattttagtgttatcttacgatgagcagcaactatctctagagcatatc 208
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11459 tgtgctggtgaaattttagtgttatcttacgatgagcagcaactatctctagagcatatc 11518

                                                                         
Query: 209   cttttcgatcaggaaaatgtgaaatctcaaaatatagcattgaagggcccatccggtgtt 268
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11519 cttttcgatcaggaaaatgtgaaatctcaaaatatagcattgaagggcccatccggtgtt 11578

                                                                         
Query: 269   tttaaagatttagtaatgtttgaccatttgcttgtagttgcgtttgagaaatgtaccatt 328
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11579 tttaaagatttagtaatgtttgaccatttgcttgtagttgcgtttgagaaatgtaccatt 11638

                                                                         
Query: 329   tactacgacgtctttgataagattttagtcagtgaatatccggccataacacacgtttct 388
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11639 tactacgacgtctttgataagattttagtcagtgaatatccggccataacacacgtttct 11698

                                                                         
Query: 389   tgcatttcagccatttctcccgatactatggtattgttgaccgaaaacaactcagttatc 448
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11699 tgcatttcagccatttctcccgatactatggtattgttgaccgaaaacaactcagttatc 11758

                                                                         
Query: 449   tttatgagtaagtggggaaatatattattatcaatcccaatcgatgagagccaattcaaa 508
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11759 tttatgagtaagtggggaaatatattattatcaatcccaatcgatgagagccaattcaaa 11818

                                                                         
Query: 509   atcctgcattgctcgcttatagataccaagctattaataagtggatcgaatggtactcta 568
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11819 atcctgcattgctcgcttatagataccaagctattaataagtggatcgaatggtactcta 11878

                                                                         
Query: 569   cagctttgggatctttgg-aaaaagttagacagttctctctccaatttcagaacaagtca 627
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 11879 cagctttgggatctttggaaaaaagttagacagttctctctccaatttcagaacaagtca 11938

                                                                         
Query: 628   agtcttcactttactcaatgataacaatgatatactactttactctcctatgagtgattc 687
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11939 agtcttcactttactcaatgataacaatgatatactactttactctcctatgagtgattc 11998

                                                                         
Query: 688   cacaaatacgagcacttttcaaacaattaagttaccgactaaaacagtttacaacaacat 747
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11999 cacaaatacgagcacttttcaaacaattaagttaccgactaaaacagttaacaacaacat 12058

                                                                         
Query: 748   tagtacctgttagacanatggngatttgacgttaatggcagtgtatgtaggtaacaaaga 807
             |||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||||||
Sbjct: 12059 tagtacctgtaagacaaatgggattttgacgttaatggcagtgtatgtaggtaacaaaga 12118

                                                                         
Query: 808   tattttgctcatcaatttcttgaactccaacacatggaatagtttttgacccaatggata 867
             ||||||||||||||||||||||||||||||||||||| |||  |||||||| |||| |||
Sbjct: 12119 tattttgctcatcaatttcttgaactccaacacatgg-ataagttttgaccaaatgaata 12177

                                                  
Query: 868   tctaggatatcgattggcttggggacgactatttgct 904
             || || |||||||||||||||||||||||||||||||
Sbjct: 12178 tcaagaatatcgattggcttggggacgactatttgct 12214


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6057
Number of Sequences: 1807
Number of extensions: 6057
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)