BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZA09FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1409                                                        1580   0.0  

>3x_Contig1409 
          Length = 9404

 Score = 1580 bits (797), Expect = 0.0
 Identities = 823/829 (99%), Gaps = 2/829 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   tcttgtcgggatataccttggtgctacaacaagtctttttaactctaatgatgttttttc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4972 tcttgtcgggatataccttggtgctacaacaagtctttttaactctaatgatgttttttc 4913

                                                                        
Query: 147  tgatcccaaagatttcttgttggggattcagaatttaggtgtgaaggatctctacttgac 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4912 tgatcccaaagatttcttgttggggattcagaatttaggtgtgaaggatctctacttgac 4853

                                                                        
Query: 207  tccagaattactgtatttgataatggataaagccgctggattattggcgtcacaatctaa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4852 tccagaattactgtatttgataatggataaagccgctggattattggcgtcacaatctaa 4793

                                                                        
Query: 267  acaaaacgcaagtctgaagaaagaagttcttttgaaaaatggatccactatctccagtgg 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4792 acaaaacgcaagtctgaagaaagaagttcttttgaaaaatggatccactatctccagtgg 4733

                                                                        
Query: 327  atttatgacaaatattcaaaatataatggtccctttcaatggccgtcctaaattcactac 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4732 atttatgacaaatattcaaaatataatggtccctttcaatggccgtcctaaattcactac 4673

                                                                        
Query: 387  tatagaggcattgttagcaaaatactctcacttaggagtctcttcttcccaagtcaacta 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4672 tatagaggcattgttagcaaaatactctcacttaggagtctcttcttcccaagtcaacta 4613

                                                                        
Query: 447  cgtctatgaacatcatttcaatccctttatatcgatgcgatcttacctaggaattccccc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 cgtctatgaacatcatttcaatccctttatatcgatgcgatcttacctaggaattccccc 4553

                                                                        
Query: 507  tgttgatatttatttggagccaatttgtttcagagaaggcataatcagtgaagtggatcc 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 tgttgatatttatttggagccaatttgtttcagagaaggcataatcagtgaagtggatcc 4493

                                                                        
Query: 567  agataccattccaccgacagaattggaaaaatatgttcatttacaggattcaggtatagt 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 agataccattccaccgacagaattggaaaaatatgttcatttacaggattcaggtatagt 4433

                                                                        
Query: 627  acccgtttgtaccgatgtgtccattatcaatcctgaaactcttgaaccatgttacgagaa 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 acccgtttgtaccgatgtgtccattatcaatcctgaaactcttgaaccatgttacgagaa 4373

                                                                        
Query: 687  agatataggagaaatatggtgctgttcagaagctaccgttttcgatcattacgtttctac 746
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 agaaataggagaaatatggtgctgttcagaagctaccgttttcgatcattacgtttctac 4313

                                                                        
Query: 747  tacgagtacacaatctgagttgacaaccacgcaacaggaaattagtaaatctactaagtc 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4312 tacgagtacacaatctgagttgacaaccacgcaacaggaaattagtaaatctactaagtc 4253

                                                                        
Query: 807  aaaactaaagagagacccattcattgcggaacaatttaaagccaagatcaaatatgatgt 866
            |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 4252 aaaactaaagagagacccattcattgcggaacaatttaaagccaagatcaataatgatgt 4193

                                                             
Query: 867  tgattatgggtttgacgtattttgagaactggtgatttaggttttatca 915
            |||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 4192 tgataatggg-ttgacgta-tttgagaactggtgatttaggttttatca 4146


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6829
Number of Sequences: 1807
Number of extensions: 6829
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)