BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZA12RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1700 1598 0.0 >3x_Contig1700 Length = 16332 Score = 1598 bits (806), Expect = 0.0 Identities = 855/870 (98%), Gaps = 2/870 (0%) Strand = Plus / Plus Query: 47 tgatgttatcaaaccgtatattgaaggaatgtttcaggatagacgtaatccagaagaaag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14771 tgatgttatcaaaccgtatattgaaggaatgtttcaggatagacgtaatccagaagaaag 14830 Query: 107 gctgttggaacctggggtcataccagctggtaataccaccgtggattctgacgatactgc 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14831 gctgttggaacctggggtcataccagctggtaataccaccgtggattctgacgatactgc 14890 Query: 167 tgtcgatgagaacgatggtggtatcgttcccacttctgatatagtggtagttgatgaaga 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14891 tgtcgatgagaacgatggtggtatcgttcccacttctgatatagtggtagttgatgaaga 14950 Query: 227 gcctgataatgcagatgacagtggtgttcatgatatagaattgaatgacgaagaagatct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14951 gcctgataatgcagatgacagtggtgttcatgatatagaattgaatgacgaagaagatct 15010 Query: 287 cgaagacgatataaacgatttccgtttaactgaaagagtaaaagattatgactcacaagc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15011 cgaagacgatataaacgatttccgtttaactgaaagagtaaaagattatgactcacaagc 15070 Query: 347 tgcccttgatagtgaacaagaaatacacgataaaatgcaagaagggctcttacgtgctca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15071 tgcccttgatagtgaacaagaaatacacgataaaatgcaagaagggctcttacgtgctca 15130 Query: 407 gactgaagatttggctatcagtgacgagcccccattgttccgcatgcaaaagagctcaga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15131 gactgaagatttggctatcagtgacgagcccccattgttccgcatgcaaaagagctcaga 15190 Query: 467 tgcccacaatatttcatggtctgctgaagtcataaggatagacaagttgcatgagccaat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15191 tgcccacaatatttcatggtctgctgaagtcataaggatagacaagttgcatgagccaat 15250 Query: 527 caggcagaagacgagaatccaattgagtgcagtaaataaacaaacttcctttatgcgtac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15251 caggcagaagacgagaatccaattgagtgcagtaaataaacaaacttcctttatgcgtac 15310 Query: 587 acaattggaatcattgttcaacaaacctatcagtgatcgggagctcggggcattggcatg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15311 acaattggaatcattgttcaacaaacctatcagtgatcgggagctcggggcattggcatg 15370 Query: 647 gcttttagggttctggttaggcgacggctatagaaggtgttcaatgtttgcattaaacaa 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15371 gcttttagggttctggttaggcgacggctatagaaggtgttcaatgtttgcattaaacaa 15430 Query: 707 agaagatcacgatgtcaattagactttgaaaaggtacggcgaaatctgggtttgagtatg 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15431 agaagatcacgatgtcaattagactttgaaaaggtacggcgaaatctgggtttgagtatg 15490 Query: 767 agaatggtaaattgcatggaaaanttaggtgccacagcatntttattcaacanacctgng 826 ||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||| | Sbjct: 15491 agaatggtaaattgcatggaaaatttaggtgcaacagcatttttattcaacaaacctggg 15550 Query: 827 aaagttaggttattgac-acaggcattccattctgggatgtagtcaagaatctcgag-tt 884 || | ||||||||||| |||||||||||||||||| |||||||||||||||||||| || Sbjct: 15551 aagttaaggttattgacaacaggcattccattctggaatgtagtcaagaatctcgagttt 15610 Query: 885 atagttaacaagggaaaggacttttcaaaa 914 ||||| ||||||| |||| ||||| ||||| Sbjct: 15611 atagtaaacaaggaaaagaactttccaaaa 15640 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5880 Number of Sequences: 1807 Number of extensions: 5880 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)