BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZB05FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig362 1433 0.0 >3x_Contig362 Length = 1532 Score = 1433 bits (723), Expect = 0.0 Identities = 803/822 (97%), Gaps = 7/822 (0%) Strand = Plus / Plus Query: 90 cgtgagaaagatgctgttagtgatgaggagacactcttcatggacaccacatcatctctg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgtgagaaagatgctgttagtgatgaggagacactcttcatggacaccacatcatctctg 448 Query: 150 tccgaataagaatgtgggtggttataagcgtgaatatttctgttggaatttgaagggg-t 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 449 tccgaataagaatgtgggtggttataagcgtgaatatttctgttggaatttgaagggggt 508 Query: 209 tcttattgg-aatttttgtaactgtcgacttagatt-catatatgctagatcttttggtc 266 ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 509 tcttattgggaattgctgtaactgtcgacttagattacatatatgctagatcttttggtc 568 Query: 267 cgggcactatttcctaacgaaaagtgtaatgatttgggttgctctccttgccctagagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cgggcactatttcctaacgaaaagtgtaatgatttgggttgctctccttgccctagagat 628 Query: 327 gggttttcagaatctgtcttcgaaagaacgtcaaaatcagtagtagaatcattagtcaac 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 gggttttcagaatctgtcttcgaaagaacgtcaaaatcagtagtagaatcattagtcaac 688 Query: 387 gtccgctgtagcgattcgctatgtaaatttggagtttcggcatcttttgtgagtttcggt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 gtccgctgtagcgattcgctatgtaaatttggagtttcggcatcttttgtgagtttcggt 748 Query: 447 aatggcagtgcaatgttcgatcttatcgtcattctattatcttggacatcgtccccattt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 aatggcagtgcaatgttcgatcttatcgtcattctattatcttggacatcgtccccattt 808 Query: 507 gaactttcacgtctctcattcgtcaactctaagccaatgggtgcggatatttgcatatca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gaactttcacgtctctcattcgtcaactctaagccaatgggtgcggatatttgcatatca 868 Query: 567 cttagaacaggatttgtgtccacctccgttgtggtccttgacagtagaggtttttgagtc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 cttagaacaggatttgtgtccacctccgttgtggtccttgacagtagaggtttttgagtc 928 Query: 627 ataaaatctggtatctccggcttactattattgttattactggaattcctgttatcattg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 ataaaatctggtatctccggcttactattattgttattactggaattcctgttatcattg 988 Query: 687 gtaccgtcatcactattactcccatcacccatatcacgtaataagctcatatccctactt 746 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 989 gtaccgtcatcactattactcccatcacccatatcaggtaataagctcatatccctactt 1048 Query: 747 gactgggacatgagatatatgtgtgtgagtcagtcctgaactgaatccatatctgaatct 806 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1049 gactgggacatgagatatatgtgtgtgagtcagtcgtgaactgaatcgatatctgaatct 1108 Query: 807 atgtctattgatgcctcactgcagcaaggattttggttcacttctctttaattttggtta 866 |||||||||||||| ||||||||||||| ||||| ||| |||||||||| |||||| ||| Sbjct: 1109 atgtctattgatgcttcactgcagcaagtatttt-gtttacttctcttt-attttgttta 1166 Query: 867 aacatttgaaaatcggcatccttttaaaccaagcttttgaac 908 ||||||| |||||||||||||| |||| |||||||||||| Sbjct: 1167 tacatttg--aatcggcatcctttaaaacaaagcttttgaac 1206 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5945 Number of Sequences: 1807 Number of extensions: 5945 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)