BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZB07FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1589 1612 0.0 >3x_Contig1589 Length = 10239 Score = 1612 bits (813), Expect = 0.0 Identities = 827/829 (99%), Gaps = 2/829 (0%) Strand = Plus / Plus Query: 85 agtgagcgtgcacctgagagagctt-acaggaccggggcaagtcttctataggaaaaagc 143 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3571 agtgagcgtgcacctgagagagcttcacaggaccggggcaagtcttctataggaaaaagc 3630 Query: 144 tttttccagcgatgtaacattcagtatttacgttagaactatataaaggtagaaagtgtt 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3631 tttttccagcgatgtaacattcagtatttacgttagaactatataaaggtagaaagtgtt 3690 Query: 204 tttgtgtgttactgcatcgataagtttttaatggtaggatagtttgttctagctaaaggc 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3691 tttgtgtgttactgcatcgataagtttttaatggtaggatagtttgttctagctaaaggc 3750 Query: 264 agcatcaatcacattgacaacgcaaacgcaatgtctttatcatatgtgaccaatccattt 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3751 agcatcaatcacattgacaacgcaaacgcaatgtctttatcatatgtgaccaatccattt 3810 Query: 324 ggtcttccaactgagagcactcagttgccaactttcacaacaccagtgaatgcaattaac 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3811 ggtcttccaactgagagcactcagttgccaactttcacaacaccagtgaatgcaattaac 3870 Query: 384 tctgtgttgttcagaaatctgaagagtattttcagttacaaaacattctcagaccctgat 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3871 tctgtgttgttcagaaatctgaagagtattttcagttacaaaacattctcagaccctgat 3930 Query: 444 ttattggatgcttctatcaaaaagttagctgaaagagagaacggtttgttctttaaggaa 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3931 ttattggatgcttctatcaaaaagttagctgaaagagagaacggtttgttctttaaggaa 3990 Query: 504 ttggacgtaagatcaggtgcaggcttgactactttgggttttgctaagggttcttccgac 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3991 ttggacgtaagatcaggtgcaggcttgactactttgggttttgctaagggttcttccgac 4050 Query: 564 cttgctggtattatcactccaggttatgctttgccttatttcgtcagcagtttcaaacaa 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4051 cttgctggtattatcactccaggttatgctttgccttatttcgtcagcagtttcaaacaa 4110 Query: 624 gaaatcgacacccagtcgaaattcgtctttagcgttggttcgttggattatgatgaggct 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4111 gaaatcgacacccagtcgaaattcgtctttagcgttggttcgttggattatgatgaggct 4170 Query: 684 tctggttctataatcaacgattatttgactcctttgaaagctgcaaaggatttggggttc 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4171 tctggttctataatcaacgattatttgactcctttgaaagctgcaaaggatttggggttc 4230 Query: 744 cctgtcattacaccattgcaaatctccgaagttaaagctaccacgttattgaccttggca 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4231 cctgtcattacaccattgcaaatctccgaagttaaagctaccacgttattgaccttggca 4290 Query: 804 ttggctaaatacggttcaggtttgggtgcagttcagttatttgatggtgcccaatatgcg 863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4291 ttggctaaatacggttcaggtttgggtgcagttcagttatttgatggtgcccaatatgcg 4350 Query: 864 agaactgtcactagagtggaagat-agatgcaagatagatttattgaat 911 |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4351 agaactgtcactagagtggaagataagatgcaagatagatttattgaat 4399 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5716 Number of Sequences: 1807 Number of extensions: 5716 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)