BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZB09RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1653 1570 0.0 >3x_Contig1653 Length = 14012 Score = 1570 bits (792), Expect = 0.0 Identities = 862/883 (97%), Gaps = 3/883 (0%) Strand = Plus / Plus Query: 48 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6478 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 6537 Query: 108 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6538 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 6597 Query: 168 gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6598 gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 6657 Query: 228 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6658 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 6717 Query: 288 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6718 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 6777 Query: 348 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6778 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 6837 Query: 408 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6838 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 6897 Query: 468 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6898 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 6957 Query: 528 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6958 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 7017 Query: 588 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7018 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 7077 Query: 648 atcatttgatctttgaatcggaggaagataaactggctccctcac-aaaggcattagaaa 706 ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| Sbjct: 7078 atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 7137 Query: 707 aagaaattgaatctgtagatgaggaaattaccagattgaaggagcangcctctgctttac 766 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 7138 aagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgctttac 7197 Query: 767 agaaagagatggagtnaaaccagggaatgggatatgaccctttatgaccctacgnctata 826 ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||| Sbjct: 7198 agaaagagatggagtaaaaccagggaatgggatatgaccttttatgaccttacgtctata 7257 Query: 827 tgnatatatatatattaggtaagcgaaaaatatttacatgtctatgattcaatgaacgtt 886 || ||||||||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 7258 tgtatatatatata-taactcagcgaaaaatatttacatgtctatgattcaatgaacgtt 7316 Query: 887 gaagaccaacttttcaggatagacg-cgnacgttctgacgaat 928 ||||||||| |||||||||||||| || |||||||||||||| Sbjct: 7317 gaagaccaaactttcaggatagacgccgcacgttctgacgaat 7359 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9335 Number of Sequences: 1807 Number of extensions: 9335 Number of successful extensions: 77 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)