BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZB10FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1552 0.0 >3x_Contig1647 Length = 14353 Score = 1552 bits (783), Expect = 0.0 Identities = 819/829 (98%), Gaps = 2/829 (0%) Strand = Plus / Minus Query: 86 attgtcccggtttcccttggtgttattctttgagttctctgttccatctccatatccaat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11225 attgtcccggtttcccttggtgttattctttgagttctctgttccatctccatatccaat 11166 Query: 146 gccttcgtctcagcaatcacatgcttgcaatcccctaattccccacacatatcgcacaca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11165 gccttcgtctcagcaatcacatgcttgcaatcccctaattccccacacatatcgcacaca 11106 Query: 206 tcatacatgctctcaaaccttacgtcgggcctcgttgcgtgatggttaaaaaggtctgct 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11105 tcatacatgctctcaaaccttacgtcgggcctcgttgcgtgatggttaaaaaggtctgct 11046 Query: 266 atggcaactaatccagaatcatgatagttgtcgatctcaaatactcttgacgatatggcg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11045 atggcaactaatccagaatcatgatagttgtcgatctcaaatactcttgacgatatggcg 10986 Query: 326 aatgctatagcagcaaattctttaaaattcgaagagacttgcttctgatcttctaaattg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10985 aatgctatagcagcaaattctttaaaattcgaagagacttgcttctgatcttctaaattg 10926 Query: 386 aagtcgaacaaatacggtattttcagcccaaattcttcgttccacttacgggataatgca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10925 aagtcgaacaaatacggtattttcagcccaaattcttcgttccacttacgggataatgca 10866 Query: 446 ataccaactttgaaaccattttctatctcttcttgtggagacaacgcctcgaatacaaca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10865 ataccaactttgaaaccattttctatctcttcttgtggagacaacgcctcgaatacaaca 10806 Query: 506 tccaatgcagtattcttcagcaaaattttctcattatcttcccagtatgccggtggaaga 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10805 tccaatgcagtattcttcagcaaaattttctcattatcttcccagtatgccggtggaaga 10746 Query: 566 tatagactcccattttgtctgtgtgaaatgctcttcaaatatttgtaccaatggctttca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10745 tatagactcccattttgtctgtgtgaaatgctcttcaaatatttgtaccaatggctttca 10686 Query: 626 acttgaaatatgaatacttcataaatatatgcaatgtttaatgccaacatgccttttacc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10685 acttgaaatatgaatacttcataaatatatgcaatgtttaatgccaacatgccttttacc 10626 Query: 686 tcgctatcaaccagtagattggcaatgctactattttctgcagtgaaaacagaagatttc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10625 tcgctatcaaccagtagattggcaatgctactattttctgcagtgaaaacagaagatttc 10566 Query: 746 ggaatcctaaggagtacagtgtcctncttcaaatcctttaatgcaaacacntcctaacca 805 ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| Sbjct: 10565 ggaatcctaaggagtacagtgtcctccttcaaatcctttaatgcaaacactcctaaacca 10506 Query: 806 ccataatcagatctttctatctcacagcccggcagtgtggaaaaaaccccttggattcca 865 ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 10505 ccataatcagatcttctaatctcacag-ccggcagtgtgg-aaaaaccccttggattcca 10448 Query: 866 gtacaaatgttagaatatcatctgtatcactggagtctgtattagacat 914 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10447 gtacaaatgttagaatatcatctgtatcactggagtctgtattagacat 10399 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6101 Number of Sequences: 1807 Number of extensions: 6101 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)