BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZB10RM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1540                                                        1665   0.0  

>3x_Contig1540 
          Length = 9505

 Score = 1665 bits (840), Expect = 0.0
 Identities = 856/860 (99%), Gaps = 1/860 (0%)
 Strand = Plus / Plus

                                                                        
Query: 50   agtaacttgctcggtcatatcgtatcaatgtttagatatcaaactgagggtttagttatg 109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7077 agtaacttgctcggtcatatcgtatcaatgtttagatatcaaactgagggtttagttatg 7136

                                                                        
Query: 110  cttgtctctaatctttacaggtatcgtcatcatcatcaccaaaatcaacatttaccacat 169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7137 cttgtctctaatctttacaggtatcgtcatcatcatcaccaaaatcaacatttaccacat 7196

                                                                        
Query: 170  acataatttcttaatgatttgatattgaagaatcatgaaaattttctaagatgaggtaaa 229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7197 acataatttcttaatgatttgatattgaagaatcatgaaaattttctaagatgaggtaaa 7256

                                                                        
Query: 230  caggttattcttatctatgagaaaatgctagttaatacttcacataacggccagcttgtt 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7257 caggttattcttatctatgagaaaatgctagttaatacttcacataacggccagcttgtt 7316

                                                                        
Query: 290  tgtaacttgcctttgcctttaatggttatgatatgtaagcaaatttgtgctcacctcgag 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7317 tgtaacttgcctttgcctttaatggttatgatatgtaagcaaatttgtgctcacctcgag 7376

                                                                        
Query: 350  ggttctgctatagcgtacctgaggactcttccttcagtacgctatggcctccgccgtcct 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7377 ggttctgctatagcgtacctgaggactcttccttcagtacgctatggcctccgccgtcct 7436

                                                                        
Query: 410  ctattcacgtgatacaaatggtcaaattaggtaacacataatgactccgttgaatcgaga 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7437 ctattcacgtgatacaaatggtcaaattaggtaacacataatgactccgttgaatcgaga 7496

                                                                        
Query: 470  atagagtattcacagatccgtcagacgtttcgaatgtagctcttttcttatgaatatgaa 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7497 atagagtattcacagatccgtcagacgtttcgaatgtagctcttttcttatgaatatgaa 7556

                                                                        
Query: 530  accagcgtagctggtaaagcaattttgcaggaattctccgtcgctgtcatggagctgacg 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7557 accagcgtagctggtaaagcaattttgcaggaattctccgtcgctgtcatggagctgacg 7616

                                                                        
Query: 590  ctatgattttggaggaacttttataaggaccctaagataaatttatcactatttaaaaac 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7617 ctatgattttggaggaacttttataaggaccctaagataaatttatcactatttaaaaac 7676

                                                                        
Query: 650  aacaaattcttttacgaagaaccgccccatatatagcctcagctctgtctctaaattcgc 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7677 aacaaattcttttacgaagaaccgccccatatatagcctcagctctgtctctaaattcgc 7736

                                                                        
Query: 710  caattataaagttttaagttgccaatacatattacattcgctaccaaattatcaactttt 769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7737 caattataaagttttaagttgccaatacatattacattcgctaccaaattatcaactttt 7796

                                                                        
Query: 770  tctctttgataataaattcatcacttcgattcagttttaat-acccaaagaaaagataag 828
            ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 7797 tctctttgataataaattcatcacttcgattcagttttaataaccaaaagaaaagataag 7856

                                                                        
Query: 829  aaaagatggttgattgctcatcccacgaaacagacatgcattacttattcaatgatgttt 888
            |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7857 aaagaatggttgattgctcatcccacgaaacagacatgcattacttattcaatgatgttt 7916

                                
Query: 889  tgcagcttgattcggggcaa 908
            ||||||||||||||||||||
Sbjct: 7917 tgcagcttgattcggggcaa 7936


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7693
Number of Sequences: 1807
Number of extensions: 7693
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)