BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZB11FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 1513 0.0 >3x_Contig1642 Length = 16641 Score = 1513 bits (763), Expect = 0.0 Identities = 833/847 (98%), Gaps = 7/847 (0%) Strand = Plus / Minus Query: 88 tggcgttgctgctatttgtttatttaagcatcatactggaatttccaagacagcaatatt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7814 tggcgttgctgctatttgtttatttaagcatcatactggaatttccaagacagcaatatt 7755 Query: 148 gtacgggttagcacacttcttacgtactgcttactatgttgactatttgaaaagaagaat 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7754 gtacgggttagcacacttcttacgtactgcttactatgttgactatttgaaaagaagaat 7695 Query: 208 gaagtagtaccgtttcgaagattattttttctttgtcactatacaaatgacatgcttgtg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7694 gaagtagtaccgtttcgaagattattttttctttgtcactatacaaatgacatgcttgtg 7635 Query: 268 ccactgagcaatgtgataaagggaacttagtgttccggttctaatgttttctggttttgc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7634 ccactgagcaatgtgataaagggaacttagtgttccggttctaatgttttctggttttgc 7575 Query: 328 aaaagctatgagctttagtttataaaaagaatagaagatattttagaccttaaactagcg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7574 aaaagctatgagctttagtttataaaaagaatagaagatattttagaccttaaactagcg 7515 Query: 388 gtggcgtagagtgtaagtttgaacgttctatatacgtttctatgcgagtatttttttttc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7514 gtggcgtagagtgtaagtttgaacgttctatatacgtttctatgcgagtatttttttttc 7455 Query: 448 ctttactacgtaaatatcgcttatgcatttgatgccattttcattcttttccggcttatt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7454 ctttactacgtaaatatcgcttatgcatttgatgccattttcattcttttccggcttatt 7395 Query: 508 caaggctcgaccggccaaataacgaaaaaaaaaaaaaaaaaaagcatcaaatatttatct 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7394 caaggctcgaccggccaaataacgaaaaaaaaaaaaaaaaaaagcatcaaatatttatct 7335 Query: 568 tgctaatacactggagtaactcagagtctttcttagctccacttgactaggtaagatgaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7334 tgctaatacactggagtaactcagagtctttcttagctccacttgactaggtaagatgaa 7275 Query: 628 gtatctattcagtgtaattgattatatgactgtttttactgtacctgcctcatttcggct 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7274 gtatctattcagtgtaattgattatatgactgtttttactgtacctgcctcatttcggct 7215 Query: 688 tctaggctaccaaatgtaacgcctttggccgttcggcagaaaatcaagatacaactttga 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7214 tctaggctaccaaatgtaacgcctttggccgttcggcagaaaatcaagatacaactttga 7155 Query: 748 ctgggaaatcctgggaaatgagcacttgac-attaattatagttccgttccctaggaaag 806 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7154 ctgggaaatcctgggaaatgagcacttgacaattaattatagttccgttccctaggaaag 7095 Query: 807 aag-aaactact-ggaaacagaagat-ttggagatgccttcatcagtataggcgatggcc 863 ||| |||||||| ||||||||||||| | | |||||| | |||||||||||||||||||| Sbjct: 7094 aagaaaactactgggaaacagaagatatagaagatgcatacatcagtataggcgatggcc 7035 Query: 864 agctattatcc-taaactttg-acattatagtatatggatttatatgt-agaagggactg 920 ||||||||||| ||||||||| ||||||||||||||| |||||||||| ||| | ||||| Sbjct: 7034 agctattatccttaaactttgaacattatagtatatgtatttatatgtaagatgtgactg 6975 Query: 921 atattgc 927 ||||||| Sbjct: 6974 atattgc 6968 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 21,130 Number of Sequences: 1807 Number of extensions: 21130 Number of successful extensions: 3703 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)