BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZB11FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1642                                                        1513   0.0  

>3x_Contig1642 
          Length = 16641

 Score = 1513 bits (763), Expect = 0.0
 Identities = 833/847 (98%), Gaps = 7/847 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   tggcgttgctgctatttgtttatttaagcatcatactggaatttccaagacagcaatatt 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7814 tggcgttgctgctatttgtttatttaagcatcatactggaatttccaagacagcaatatt 7755

                                                                        
Query: 148  gtacgggttagcacacttcttacgtactgcttactatgttgactatttgaaaagaagaat 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7754 gtacgggttagcacacttcttacgtactgcttactatgttgactatttgaaaagaagaat 7695

                                                                        
Query: 208  gaagtagtaccgtttcgaagattattttttctttgtcactatacaaatgacatgcttgtg 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7694 gaagtagtaccgtttcgaagattattttttctttgtcactatacaaatgacatgcttgtg 7635

                                                                        
Query: 268  ccactgagcaatgtgataaagggaacttagtgttccggttctaatgttttctggttttgc 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7634 ccactgagcaatgtgataaagggaacttagtgttccggttctaatgttttctggttttgc 7575

                                                                        
Query: 328  aaaagctatgagctttagtttataaaaagaatagaagatattttagaccttaaactagcg 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7574 aaaagctatgagctttagtttataaaaagaatagaagatattttagaccttaaactagcg 7515

                                                                        
Query: 388  gtggcgtagagtgtaagtttgaacgttctatatacgtttctatgcgagtatttttttttc 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7514 gtggcgtagagtgtaagtttgaacgttctatatacgtttctatgcgagtatttttttttc 7455

                                                                        
Query: 448  ctttactacgtaaatatcgcttatgcatttgatgccattttcattcttttccggcttatt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7454 ctttactacgtaaatatcgcttatgcatttgatgccattttcattcttttccggcttatt 7395

                                                                        
Query: 508  caaggctcgaccggccaaataacgaaaaaaaaaaaaaaaaaaagcatcaaatatttatct 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7394 caaggctcgaccggccaaataacgaaaaaaaaaaaaaaaaaaagcatcaaatatttatct 7335

                                                                        
Query: 568  tgctaatacactggagtaactcagagtctttcttagctccacttgactaggtaagatgaa 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7334 tgctaatacactggagtaactcagagtctttcttagctccacttgactaggtaagatgaa 7275

                                                                        
Query: 628  gtatctattcagtgtaattgattatatgactgtttttactgtacctgcctcatttcggct 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7274 gtatctattcagtgtaattgattatatgactgtttttactgtacctgcctcatttcggct 7215

                                                                        
Query: 688  tctaggctaccaaatgtaacgcctttggccgttcggcagaaaatcaagatacaactttga 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7214 tctaggctaccaaatgtaacgcctttggccgttcggcagaaaatcaagatacaactttga 7155

                                                                        
Query: 748  ctgggaaatcctgggaaatgagcacttgac-attaattatagttccgttccctaggaaag 806
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 7154 ctgggaaatcctgggaaatgagcacttgacaattaattatagttccgttccctaggaaag 7095

                                                                        
Query: 807  aag-aaactact-ggaaacagaagat-ttggagatgccttcatcagtataggcgatggcc 863
            ||| |||||||| ||||||||||||| | | |||||| | ||||||||||||||||||||
Sbjct: 7094 aagaaaactactgggaaacagaagatatagaagatgcatacatcagtataggcgatggcc 7035

                                                                        
Query: 864  agctattatcc-taaactttg-acattatagtatatggatttatatgt-agaagggactg 920
            ||||||||||| ||||||||| ||||||||||||||| |||||||||| ||| | |||||
Sbjct: 7034 agctattatccttaaactttgaacattatagtatatgtatttatatgtaagatgtgactg 6975

                   
Query: 921  atattgc 927
            |||||||
Sbjct: 6974 atattgc 6968


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,130
Number of Sequences: 1807
Number of extensions: 21130
Number of successful extensions: 3703
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)