BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZC03RM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1246 1742 0.0 >3x_Contig1246 Length = 5473 Score = 1742 bits (879), Expect = 0.0 Identities = 891/896 (99%) Strand = Plus / Plus Query: 49 gaactaggaaatgcatgtcgggcgtgggtacgatggtggagaaaatgcttggtagcgaac 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 gaactaggaaatgcatgtcgggcgtgggtacgatggtggagaaaatgcttggtagcgaac 1316 Query: 109 tgaacatataactggggaaccgtatgctattcgttatggaagacataacagtcgatatca 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 tgaacatataactggggaaccgtatgctattcgttatggaagacataacagtcgatatca 1376 Query: 169 cctgattcgattgtgcataactgacattagaatcccttaaaattcttgccgtaatatttg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 cctgattcgattgtgcataactgacattagaatcccttaaaattcttgccgtaatatttg 1436 Query: 229 aaagcgcattgttatcaaacaccaccgacgcatcactatcttctattagtcgcctcaaag 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1437 aaagcgcattgttatcaaacaccaccgacgcatcactatcttctattagtcgcctcaaag 1496 Query: 289 taagcatggtgttgtatggttgaaccacaacttcggattcatcgctggggaacactgaat 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1497 taagcatggtgttgtatggttgaaccacaacttcggattcatcgctggggaacactgaat 1556 Query: 349 acgtggtgacgagcttcttatgatagctatcggccaataactccaataaattcgatccta 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1557 acgtggtgacgagcttcttatgatagctatcggccaataactccaataaattcgatccta 1616 Query: 409 aacctgatcctgtaccaccagcgactgaatggatcaattggaacgcttcaaaattttctg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1617 aacctgatcctgtaccaccagcgactgaatggatcaattggaacgcttcaaaattttctg 1676 Query: 469 tcgcatctatttctctatcaatcatatttataaattggtcttgattttctgtaccatagt 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 tcgcatctatttctctatcaatcatatttataaattggtcttgattttctgtaccatagt 1736 Query: 529 cgtaacctatcgaccatgtattaccagctcctaaattatcctgcgacacccaaacgtttc 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 cgtaacctatcgaccatgtattaccagctcctaaattatcctgcgacacccaaacgtttc 1796 Query: 589 tttcgttaaaaaaacctgggaaactgtttcgtatatcgttgataatactgggctctaaat 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1797 tttcgttaaaaaaacctgggaaactgtttcgtatatcgttgataatactgggctctaaat 1856 Query: 649 cgaaaagtaatgcacgtggagtgtaccgatttgaatcgttttgtttgaaaaaagtcactg 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1857 cgaaaagtaatgcacgtggagtgtaccgatttgaatcgttttgtttgaaaaaagtcactg 1916 Query: 709 gatggtcttctctaacggctgtgggagaatcttcttgcanacttagaccatcttgtccaa 768 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1917 gatggtcttctctaacggctgtgggagaatcttcttgcaaacttagaccatcttgtccaa 1976 Query: 769 ttccatgctctttcgccaattgtgaccagaactctcgcccaacttggttcccgcactggc 828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1977 ttccatgctctttcgccaattgtgaccagaactctcgcccaacttggttcccgcactggc 2036 Query: 829 caacttgcaaagtaattacttcaccagtcatcacaaaaaaaaactcaccaagctacggac 888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2037 caacttgcaaagtaattacttcaccagtcatcacaaaaaaaaactcaccaagctacggac 2096 Query: 889 aaagcanagacacctgatggcgtaaattctaaaatcaatccgacataacgtnaccg 944 |||||| || |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2097 aaagcaaagcaacctgatggcgtaaattctaaaatcaatccgacataacgtcaccg 2152 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5907 Number of Sequences: 1807 Number of extensions: 5907 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)