BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZC06FM1.SCF screened BAC_end
         (950 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1760                                                        1651   0.0  

>3x_Contig1760 
          Length = 27266

 Score = 1651 bits (833), Expect = 0.0
 Identities = 856/862 (99%), Gaps = 2/862 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    tagcgatgaggaggattcatagagatagaaaatctaaatctcagaacgctaccgagctaa 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24346 tagcgatgaggaggattcatagagatagaaaatctaaatctcagaacgctaccgagctaa 24287

                                                                         
Query: 146   aaggtagcgccttaggtaaagttctaggagtaaaacaagatagttcaactgacgcgcaaa 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24286 aaggtagcgccttaggtaaagttctaggagtaaaacaagatagttcaactgacgcgcaaa 24227

                                                                         
Query: 206   ctaagcaacctaatcagcccattgctataaaagaaaaagagcagagctttgaagaaatac 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24226 ctaagcaacctaatcagcccattgctataaaagaaaaagagcagagctttgaagaaatac 24167

                                                                         
Query: 266   aagcagtgagaaggtctttacccgcttataaagtacgacacgacttaatgcgccatatta 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24166 aagcagtgagaaggtctttacccgcttataaagtacgacacgacttaatgcgccatatta 24107

                                                                         
Query: 326   gagataaccagattactgtggttattggtgaaacgggttcaggtaaaacaacacaattag 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24106 gagataaccagattactgtggttattggtgaaacgggttcaggtaaaacaacacaattag 24047

                                                                         
Query: 386   cacaattcctctacgaagacggtttcactgcaaatggtagaatgattggatgtacacagc 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24046 cacaattcctctacgaagacggtttcactgcaaatggtagaatgattggatgtacacagc 23987

                                                                         
Query: 446   caagaagagtagcagctgtatcggttgctgaaagagtttccaaagaaatggataccccaa 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23986 caagaagagtagcagctgtatcggttgctgaaagagtttccaaagaaatggataccccaa 23927

                                                                         
Query: 506   ttggtgttaaagttggatactcaatcagattcgaagatcagacttcggattcaacaaaaa 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23926 ttggtgttaaagttggatactcaatcagattcgaagatcagacttcggattcaacaaaaa 23867

                                                                         
Query: 566   tcaagtttatgaccgacggtatactccttagggaggcaatgatagatccgttgcttgaga 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23866 tcaagtttatgaccgacggtatactccttagggaggcaatgatagatccgttgcttgaga 23807

                                                                         
Query: 626   aatattcatgtattataatggacgaagctcatgaacgatctttgaacaccgatgtgctcc 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23806 aatattcatgtattataatggacgaagctcatgaacgatctttgaacaccgatgtgctcc 23747

                                                                         
Query: 686   tagggatcttcaaaacattattagctcgaagacacgatttanaacttgtcgtgacatcgg 745
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 23746 tagggatcttcaaaacattattagctcgaagacacgatttaaaacttgtcgtgacatcgg 23687

                                                                         
Query: 746   caacaatgaatgcagataagttctcccaattctttggtaatgcgccacaatatttcatac 805
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23686 caacaatgaatgcagataagttctcccaattctttggtaatgcgccacaatatttcatac 23627

                                                                         
Query: 806   cgggaaaaacttntcccgtcgaaatcatttacactaaccatccagtacctgattacgttg 865
             ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23626 cgggaaaaactttccccgtcgaaatcatttacactaaccatccagtacctgattacgttg 23567

                                                                         
Query: 866   aatctgctgttcanaaagctttaga-atacatttatctac-ccaatttcaaatggagata 923
             ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 23566 aatctgctgttcaaaaagctttagatatacatttatctacaccaatttcaaatggagata 23507

                                   
Query: 924   tcttgatatttatgactggtca 945
             ||||||||||||||||||||||
Sbjct: 23506 tcttgatatttatgactggtca 23485


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6090
Number of Sequences: 1807
Number of extensions: 6090
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)