BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZC06RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1512 1661 0.0 >3x_Contig1512 Length = 8803 Score = 1661 bits (838), Expect = 0.0 Identities = 881/893 (98%), Gaps = 2/893 (0%) Strand = Plus / Plus Query: 52 cagacagaaacattttacagctgcagtgaagaatggtggaaacagcaccacaaaaagtaa 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6295 cagacagaaacattttacagctgcagtgaagaatggtggaaacagcaccacaaaaagtaa 6354 Query: 112 tgaagttaacgaaaccgatgatgaaatggaatcagtagatcgaaatttatacaatggcta 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6355 tgaagttaacgaaaccgatgatgaaatggaatcagtagatcgaaatttatacaatggcta 6414 Query: 172 tgcttcgattacacaaacatcattctctggtgccgataaaaacgctacaaagactaatga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6415 tgcttcgattacacaaacatcattctctggtgccgataaaaacgctacaaagactaatga 6474 Query: 232 tgcaaataatgataacggcatagttaagtccccttcgactgcatccatatccagctttat 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6475 tgcaaataatgataacggcatagttaagtccccttcgactgcatccatatccagctttat 6534 Query: 292 cagtcagggaagcacaaactccgtagctcaacaaacaaattctgctgaaaaatcgaaagc 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6535 cagtcagggaagcacaaactccgtagctcaacaaacaaattctgctgaaaaatcgaaagc 6594 Query: 352 tgtgaggagcttaactgatctccttagtttgacaggctgataacaattacgaactctctt 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6595 tgtgaggagcttaactgatctccttagtttgacaggctgataacaattacgaactctctt 6654 Query: 412 atgagattatttttctttgatcgttgtatatcgacagaaaaaccgtcttcctagctctaa 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6655 atgagattatttttctttgatcgttgtatatcgacagaaaaaccgtcttcctagctctaa 6714 Query: 472 tttttacaactaacattttaagtgtagactctcttttctgtttatagttatttcatgaaa 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6715 tttttacaactaacattttaagtgtagactctcttttctgtttatagttatttcatgaaa 6774 Query: 532 tccataagacttaatgatacatttttcttctttgattcctctttctccttcttacttgcc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6775 tccataagacttaatgatacatttttcttctttgattcctctttctccttcttacttgcc 6834 Query: 592 aataagttggataacgttgactgtttccttttcttagctctctccttcgcagtggtattt 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6835 aataagttggataacgttgactgtttccttttcttagctctctccttcgcagtggtattt 6894 Query: 652 ttcttgatcttatcatcattgacttcgggagacgattgtctcggccattggatatcgact 711 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6895 ttcttgatcttatcatcattgacttcgggagacgattgtctcggccattggatatcgact 6954 Query: 712 ttgggagatggctccttactggaagcatcttttttgggctccgttttatctacctcgatg 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6955 ttgggagatggctccttactggaagcatcttttttgggctccgttttatctacctcgatg 7014 Query: 772 ttatattcgctcttgcaatggccacattgatatctcaaattccgaggtactaccccgttc 831 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 7015 ttatattcgctctggcaatggccacattgatatctcaaattccgagttactaccccgttc 7074 Query: 832 tcgtcagtttctctcagcaatttcatttgtagggtatatccngctatcctta-acaccca 890 ||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||| Sbjct: 7075 tcgtcagtttctctcagcaatttcattgtaaggttatatccggctatccttacacaccca 7134 Query: 891 caggttccacagaacttgaca-tatcagcacggatgctctccggtaacggcag 942 ||| | ||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 7135 cagttcccacagaacttgacattatcagcacggatgctctcgggtaacggcag 7187 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7133 Number of Sequences: 1807 Number of extensions: 7133 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)