BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZC12FM1.SCF screened BAC_end
         (950 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1677                                                        1425   0.0  

>3x_Contig1677 
          Length = 15081

 Score = 1425 bits (719), Expect = 0.0
 Identities = 735/739 (99%), Gaps = 1/739 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    taaacctaaagacaattccattgaacaatcgaaacaggttaaacagattgtggagttgta 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14308 taaacctaaagacaattccattgaacaatcgaaacaggttaaacagattgtggagttgta 14367

                                                                         
Query: 147   ctgttgacattcacgattagttctccatcttgaatctaaccgagaacagcagtttttatc 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14368 ctgttgacattcacgattagttctccatcttgaatctaaccgagaacagcagtttttatc 14427

                                                                         
Query: 207   acaggtgggtttgggaataatataaaagaaaaaatgttgcgtcaagtggtaagatcatcc 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14428 acaggtgggtttgggaataatataaaagaaaaaatgttgcgtcaagtggtaagatcatcc 14487

                                                                         
Query: 267   ggcgtttttgcaaggaacagttgtagattaggtttggttcgttatcaatcgactgctggt 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14488 ggcgtttttgcaaggaacagttgtagattaggtttggttcgttatcaatcgactgctggt 14547

                                                                         
Query: 327   acatctactccagctgctgcggttgatccaaagatttctcaaatcgttcaagatatctcc 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14548 acatctactccagctgctgcggttgatccaaagatttctcaaatcgttcaagatatctcc 14607

                                                                         
Query: 387   aaattgactttattggaaacttctgctttgattcaagaattgaagactcaattgaacatc 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14608 aaattgactttattggaaacttctgctttgattcaagaattgaagactcaattgaacatc 14667

                                                                         
Query: 447   ccagatatttcgttcccagcagctggtgctggttcagctgccccagctgctccagctgaa 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14668 ccagatatttcgttcccagcagctggtgctggttcagctgccccagctgctccagctgaa 14727

                                                                         
Query: 507   gaagccaaggaagaagaagtcgttgaagagaagactattttctccatcaagttagaatcg 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14728 gaagccaaggaagaagaagtcgttgaagagaagactattttctccatcaagttagaatcg 14787

                                                                         
Query: 567   tttgatgccaagtctaagcctaagatcatcaaagaagttaagaacttgttaggtttgtca 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14788 tttgatgccaagtctaagcctaagatcatcaaagaagttaagaacttgttaggtttgtca 14847

                                                                         
Query: 627   ttggttgaagctaagaagtttgtggaaagtgctccaaaggttttgaaggaaaacgtcgct 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14848 ttggttgaagctaagaagtttgtggaaagtgctccaaaggttttgaaggaaaacgtcgct 14907

                                                                         
Query: 687   aaggaagacgctgacaaggttaaggctgcattggaagggctaggtgccaagattgtcttt 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 14908 aaggaagacgctgacaaggttaaggctgcattggaagggctaggtgccaagattgtcttg 14967

                                                                         
Query: 747   ggatagacagatacgtcgaacacctcacgcatgtaaattccccatgtcaaaacgagttct 806
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14968 gaatagacagatacgtcgaacacctcacgcatgtaaattccccatgtcaaaacgagttct 15027

                                
Query: 807   cttctcatt-tcctgtaca 824
             |||| |||| |||||||||
Sbjct: 15028 cttcacattgtcctgtaca 15046


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8381
Number of Sequences: 1807
Number of extensions: 8381
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)