BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZC12FM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1677 1425 0.0 >3x_Contig1677 Length = 15081 Score = 1425 bits (719), Expect = 0.0 Identities = 735/739 (99%), Gaps = 1/739 (0%) Strand = Plus / Plus Query: 87 taaacctaaagacaattccattgaacaatcgaaacaggttaaacagattgtggagttgta 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14308 taaacctaaagacaattccattgaacaatcgaaacaggttaaacagattgtggagttgta 14367 Query: 147 ctgttgacattcacgattagttctccatcttgaatctaaccgagaacagcagtttttatc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14368 ctgttgacattcacgattagttctccatcttgaatctaaccgagaacagcagtttttatc 14427 Query: 207 acaggtgggtttgggaataatataaaagaaaaaatgttgcgtcaagtggtaagatcatcc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14428 acaggtgggtttgggaataatataaaagaaaaaatgttgcgtcaagtggtaagatcatcc 14487 Query: 267 ggcgtttttgcaaggaacagttgtagattaggtttggttcgttatcaatcgactgctggt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14488 ggcgtttttgcaaggaacagttgtagattaggtttggttcgttatcaatcgactgctggt 14547 Query: 327 acatctactccagctgctgcggttgatccaaagatttctcaaatcgttcaagatatctcc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14548 acatctactccagctgctgcggttgatccaaagatttctcaaatcgttcaagatatctcc 14607 Query: 387 aaattgactttattggaaacttctgctttgattcaagaattgaagactcaattgaacatc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14608 aaattgactttattggaaacttctgctttgattcaagaattgaagactcaattgaacatc 14667 Query: 447 ccagatatttcgttcccagcagctggtgctggttcagctgccccagctgctccagctgaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14668 ccagatatttcgttcccagcagctggtgctggttcagctgccccagctgctccagctgaa 14727 Query: 507 gaagccaaggaagaagaagtcgttgaagagaagactattttctccatcaagttagaatcg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14728 gaagccaaggaagaagaagtcgttgaagagaagactattttctccatcaagttagaatcg 14787 Query: 567 tttgatgccaagtctaagcctaagatcatcaaagaagttaagaacttgttaggtttgtca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14788 tttgatgccaagtctaagcctaagatcatcaaagaagttaagaacttgttaggtttgtca 14847 Query: 627 ttggttgaagctaagaagtttgtggaaagtgctccaaaggttttgaaggaaaacgtcgct 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14848 ttggttgaagctaagaagtttgtggaaagtgctccaaaggttttgaaggaaaacgtcgct 14907 Query: 687 aaggaagacgctgacaaggttaaggctgcattggaagggctaggtgccaagattgtcttt 746 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14908 aaggaagacgctgacaaggttaaggctgcattggaagggctaggtgccaagattgtcttg 14967 Query: 747 ggatagacagatacgtcgaacacctcacgcatgtaaattccccatgtcaaaacgagttct 806 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14968 gaatagacagatacgtcgaacacctcacgcatgtaaattccccatgtcaaaacgagttct 15027 Query: 807 cttctcatt-tcctgtaca 824 |||| |||| ||||||||| Sbjct: 15028 cttcacattgtcctgtaca 15046 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8381 Number of Sequences: 1807 Number of extensions: 8381 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)