BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZD02RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1365 1649 0.0 >3x_Contig1365 Length = 9349 Score = 1649 bits (832), Expect = 0.0 Identities = 883/893 (98%), Gaps = 6/893 (0%) Strand = Plus / Minus Query: 46 attacaacaagattaaagcagatatatttggagaatgaggaattctattcgattgaccaa 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8245 attacaacaagattaaagcagatatatttggagaatgaggaattctattcgattgaccaa 8186 Query: 106 gtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtgagaaacggc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8185 gtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtgagaaacggc 8126 Query: 166 tacattgataaaaaatctcaacatattttagatgaattacacattagtgttaattcaact 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8125 tacattgataaaaaatctcaacatattttagatgaattacacattagtgttaattcaact 8066 Query: 226 cagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatgatcctgaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8065 cagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatgatcctgaa 8006 Query: 286 atagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatctacaattc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8005 atagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatctacaattc 7946 Query: 346 taaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattagttaacaat 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7945 taaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattagttaacaat 7886 Query: 406 aaactttgacttaatattattaaacagtgatatagtaattaaataatagaggatgaataa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7885 aaactttgacttaatattattaaacagtgatatagtaattaaataatagaggatgaataa 7826 Query: 466 aataaatgacagtgccagtaccctaaaaagtaacgggaataattaaagtcgaaacatgat 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7825 aataaatgacagtgccagtaccctaaaaagtaacgggaataattaaagtcgaaacatgat 7766 Query: 526 aaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgcctaggataataaaataat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7765 aaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgcctaggataataaaataat 7706 Query: 586 gtaatgagaaaaaatgaaatacaatgtaaaagtccgcctagttgattaataggtaaaaga 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7705 gtaatgagaaaaaatgaaatacaatgtaaaagtccgcctagttgattaataggtaaaaga 7646 Query: 646 aaaaagaattagcgaagtgattgatgcgaatagaataatatatcccgaaattaataatga 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7645 aaaaagaattagcgaagtgattgatgcgaatagaataatatatcccgaaattaataatga 7586 Query: 706 tgagtgatgataatacaatgatactgtcggngaataggaaacanataaatggtaaaatca 765 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 7585 tgagtgatgataatacaatgatactgtcggggaataggaaacaaataaatggtaaaatca 7526 Query: 766 gtctagaagaaaggaggaaa-ganaaaaaaagttgaaatagaaaacctgaaatcaagtcc 824 ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 7525 gtctagaagaa-ggaggaaaagaaaaaaaaagttgaaatagaaaacctgaaatcaagtcc 7467 Query: 825 acaagtgggtggacacatgatgatgaatgatttgtttag-aactgtg-aaaattgggtat 882 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 7466 acaagtgggtggacacatgatgatgaatgatttgtttagaaactgtgaaaaattgggtat 7407 Query: 883 cgtgtgagagtctttgtacctgga-tcgat-acagggacagttaagatgagct 933 |||||||||||||||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 7406 cgtgtgagagtctttgtacctggagtcgataacagggacagtaaagatgagct 7354 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9094 Number of Sequences: 1807 Number of extensions: 9094 Number of successful extensions: 77 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)