BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZD02RM1.SCF screened BAC_end
         (936 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1365                                                        1649   0.0  

>3x_Contig1365 
          Length = 9349

 Score = 1649 bits (832), Expect = 0.0
 Identities = 883/893 (98%), Gaps = 6/893 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   attacaacaagattaaagcagatatatttggagaatgaggaattctattcgattgaccaa 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8245 attacaacaagattaaagcagatatatttggagaatgaggaattctattcgattgaccaa 8186

                                                                        
Query: 106  gtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtgagaaacggc 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8185 gtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtgagaaacggc 8126

                                                                        
Query: 166  tacattgataaaaaatctcaacatattttagatgaattacacattagtgttaattcaact 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8125 tacattgataaaaaatctcaacatattttagatgaattacacattagtgttaattcaact 8066

                                                                        
Query: 226  cagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatgatcctgaa 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8065 cagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatgatcctgaa 8006

                                                                        
Query: 286  atagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatctacaattc 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8005 atagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatctacaattc 7946

                                                                        
Query: 346  taaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattagttaacaat 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7945 taaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattagttaacaat 7886

                                                                        
Query: 406  aaactttgacttaatattattaaacagtgatatagtaattaaataatagaggatgaataa 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7885 aaactttgacttaatattattaaacagtgatatagtaattaaataatagaggatgaataa 7826

                                                                        
Query: 466  aataaatgacagtgccagtaccctaaaaagtaacgggaataattaaagtcgaaacatgat 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7825 aataaatgacagtgccagtaccctaaaaagtaacgggaataattaaagtcgaaacatgat 7766

                                                                        
Query: 526  aaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgcctaggataataaaataat 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7765 aaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgcctaggataataaaataat 7706

                                                                        
Query: 586  gtaatgagaaaaaatgaaatacaatgtaaaagtccgcctagttgattaataggtaaaaga 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7705 gtaatgagaaaaaatgaaatacaatgtaaaagtccgcctagttgattaataggtaaaaga 7646

                                                                        
Query: 646  aaaaagaattagcgaagtgattgatgcgaatagaataatatatcccgaaattaataatga 705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7645 aaaaagaattagcgaagtgattgatgcgaatagaataatatatcccgaaattaataatga 7586

                                                                        
Query: 706  tgagtgatgataatacaatgatactgtcggngaataggaaacanataaatggtaaaatca 765
            |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 7585 tgagtgatgataatacaatgatactgtcggggaataggaaacaaataaatggtaaaatca 7526

                                                                        
Query: 766  gtctagaagaaaggaggaaa-ganaaaaaaagttgaaatagaaaacctgaaatcaagtcc 824
            ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 7525 gtctagaagaa-ggaggaaaagaaaaaaaaagttgaaatagaaaacctgaaatcaagtcc 7467

                                                                        
Query: 825  acaagtgggtggacacatgatgatgaatgatttgtttag-aactgtg-aaaattgggtat 882
            ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 7466 acaagtgggtggacacatgatgatgaatgatttgtttagaaactgtgaaaaattgggtat 7407

                                                                 
Query: 883  cgtgtgagagtctttgtacctgga-tcgat-acagggacagttaagatgagct 933
            |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 7406 cgtgtgagagtctttgtacctggagtcgataacagggacagtaaagatgagct 7354


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9094
Number of Sequences: 1807
Number of extensions: 9094
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)