BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZD09RM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1738 1651 0.0 >3x_Contig1738 Length = 21411 Score = 1651 bits (833), Expect = 0.0 Identities = 879/889 (98%), Gaps = 4/889 (0%) Strand = Plus / Plus Query: 47 ctgctgttatcctagttcctgtctcacatcccaacccagctcccagcttcatctgctttc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18926 ctgctgttatcctagttcctgtctcacatcccaacccagctcccagcttcatctgctttc 18985 Query: 107 ccatcgtctcatctctctttccaatcacaccacatataaacttcgtctcgagcttcgatt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18986 ccatcgtctcatctctctttccaatcacaccacatataaacttcgtctcgagcttcgatt 19045 Query: 167 ctttgctttttttgtgcagcaccttctatggaaaaagaaagagcaaggctggtgaaaaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19046 ctttgctttttttgtgcagcaccttctatggaaaaagaaagagcaaggctggtgaaaaag 19105 Query: 227 aaatattcagcatgggaaatctggcgatgtcatctgacactcgtcgcagcccaacagaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19106 aaatattcagcatgggaaatctggcgatgtcatctgacactcgtcgcagcccaacagaaa 19165 Query: 287 acgggtattctagcaagtgtctatggagctaccaccatgcaatacgaagaatcgccgaat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19166 acgggtattctagcaagtgtctatggagctaccaccatgcaatacgaagaatcgccgaat 19225 Query: 347 cgtgtttattttgtactgacggtgctttgcatgggtacattttggtatgtatggtctctg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19226 cgtgtttattttgtactgacggtgctttgcatgggtacattttggtatgtatggtctctg 19285 Query: 407 ggacggaaaaactaaaagtggaacccggaccagatagtatcggaaggatgattgtgatga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19286 ggacggaaaaactaaaagtggaacccggaccagatagtatcggaaggatgattgtgatga 19345 Query: 467 taatacgttgtgtggttcagttgggtaggtatggctgttgcattatatatagacaatatg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19346 taatacgttgtgtggttcagttgggtaggtatggctgttgcattatatatagacaatatg 19405 Query: 527 tctcgtccttttttttgtttttgttttctttggcattgactggttgtactactcttattt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19406 tctcgtccttttttttgtttttgttttctttggcattgactggttgtactactcttattt 19465 Query: 587 gaagagtctcaaggtttagtattctacgatcaagattaaagtagagaaaccctcggattc 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19466 gaagagtctcaaggtttagtattctacgatcaagattaaagtagagaaaccctcggattc 19525 Query: 647 gtgtttcctaaatgttaaacaactgtcaaattaacaattttcaaattactagacagattg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19526 gtgtttcctaaatgttaaacaactgtcaaattaacaattttcaaattactagacagattg 19585 Query: 707 ggagcggtgcctatggtgtcgttttccatgctatcgacctaataacagagaacgaatatg 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19586 ggagcggtgcctatggtgtcgttttccatgctatcgacctaataacagagaacgaatatg 19645 Query: 767 ctattaaagctattatgaaatccaatgatgaccccattggtttcttactctgagacgtct 826 ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||| Sbjct: 19646 ctattaaagctattatgaaatccaatgatga-cccattggttcctcactctgagacgtct 19704 Query: 827 ttgaag-aaagtgctgtcttgc-aacccaacttta-cattatttcaagtcgttccaaaat 883 |||||| ||||||||||||||| ||| |||||||| |||||||||||||||||||| ||| Sbjct: 19705 ttgaagaaaagtgctgtcttgcaaacacaactttaccattatttcaagtcgttccagaat 19764 Query: 884 aaactgtttttaccaacgatcgatttggattcggggttggcaatgtctg 932 |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 19765 aaactgtttttaccaacgatcgatttggattcggtgttggcattgtctg 19813 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7596 Number of Sequences: 1807 Number of extensions: 7596 Number of successful extensions: 88 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)