BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZE01RM1.SCF screened BAC_end
         (906 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1428                                                        1626   0.0  

>3x_Contig1428 
          Length = 9146

 Score = 1626 bits (820), Expect = 0.0
 Identities = 852/862 (98%), Gaps = 1/862 (0%)
 Strand = Plus / Minus

                                                                        
Query: 45   cggtttcctttcagctattttttcttattcataagcaacaaaaagatgcccaggaccaaa 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2742 cggtttcctttcagctattttttcttattcataagcaacaaaaagatgcccaggaccaaa 2683

                                                                        
Query: 105  aggtccagaataccggtaaatagaaggtctttattatgtcagaaacgtgaaccggggaaa 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 aggtccagaataccggtaaatagaaggtctttattatgtcagaaacgtgaaccggggaaa 2623

                                                                        
Query: 165  cctgaaacatccgaaacaccatcggtaagagaattggatcccttgtcaatttcgtgttct 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2622 cctgaaacatccgaaacaccatcggtaagagaattggatcccttgtcaatttcgtgttct 2563

                                                                        
Query: 225  gtacatcgtactaggtaatgatctcaagaaaaaagaatacaaagtgatgtaagaacgcac 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2562 gtacatcgtactaggtaatgatctcaagaaaaaagaatacaaagtgatgtaagaacgcac 2503

                                                                        
Query: 285  acagtattacgagtatgtgaaaaacaagaagaacctgaatctagcggatccccgtctgta 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2502 acagtattacgagtatgtgaaaaacaagaagaacctgaatctagcggatccccgtctgta 2443

                                                                        
Query: 345  gttttattactgtattacaacttgtagcttgttgccggaagttccttgccatgggaaacg 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2442 gttttattactgtattacaacttgtagcttgttgccggaagttccttgccatgggaaacg 2383

                                                                        
Query: 405  ttacgttacgtcttttctcatattgccatgtaaaacaaggtactgcctttgtttttcccg 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2382 ttacgttacgtcttttctcatattgccatgtaaaacaaggtactgcctttgtttttcccg 2323

                                                                        
Query: 465  tctttcttttctttttgaattggcttaggcatttctagtccaatacgtttgtgcttgcga 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2322 tctttcttttctttttgaattggcttaggcatttctagtccaatacgtttgtgcttgcga 2263

                                                                        
Query: 525  atgcaatacgtagtttcatgcacatcgaagtttaatccacctgaatcgcctgcgtaatca 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2262 atgcaatacgtagtttcatgcacatcgaagtttaatccacctgaatcgcctgcgtaatca 2203

                                                                        
Query: 585  tgtacggataaaaataaatacacactattatacaatcagataaatatttgactaatactg 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2202 tgtacggataaaaataaatacacactattatacaatcagataaatatttgactaatactg 2143

                                                                        
Query: 645  gtatgtatgcatatatatatatacactatatatatatatatagtgtatacataaagtgta 704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 gtatgtatgcatatatatatatacactatatatatatatatagtgtatacataaagtgta 2083

                                                                        
Query: 705  tatgtcctttgtgggtgatagcaacaagttggactatattgtatataattgatccagatt 764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 tatgtcctttgtgggtgatagcaacaagttggactatattgtatataattgatccagatt 2023

                                                                        
Query: 765  tcaagctgantagtacgatangaggggataataaacagctgttagcctatatatattcta 824
            |||||||||  |||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 2022 tcaagctgataagtacgatagagggggataataaacagctgttagcctatatatattcta 1963

                                                                        
Query: 825  ttccatacactttcagcgccggggtctttcctttttgttactattttgcctttttggttt 884
            ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||
Sbjct: 1962 ttccatacactttcagcgccggtttctttcctttttgttactattttgccttttt-gttt 1904

                                  
Query: 885  agggtatttcaccaaagaagtt 906
            || ||||||||||| |||||||
Sbjct: 1903 agtgtatttcaccagagaagtt 1882


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,300
Number of Sequences: 1807
Number of extensions: 14300
Number of successful extensions: 1312
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)