BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZE01RM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1428 1626 0.0 >3x_Contig1428 Length = 9146 Score = 1626 bits (820), Expect = 0.0 Identities = 852/862 (98%), Gaps = 1/862 (0%) Strand = Plus / Minus Query: 45 cggtttcctttcagctattttttcttattcataagcaacaaaaagatgcccaggaccaaa 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2742 cggtttcctttcagctattttttcttattcataagcaacaaaaagatgcccaggaccaaa 2683 Query: 105 aggtccagaataccggtaaatagaaggtctttattatgtcagaaacgtgaaccggggaaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2682 aggtccagaataccggtaaatagaaggtctttattatgtcagaaacgtgaaccggggaaa 2623 Query: 165 cctgaaacatccgaaacaccatcggtaagagaattggatcccttgtcaatttcgtgttct 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2622 cctgaaacatccgaaacaccatcggtaagagaattggatcccttgtcaatttcgtgttct 2563 Query: 225 gtacatcgtactaggtaatgatctcaagaaaaaagaatacaaagtgatgtaagaacgcac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2562 gtacatcgtactaggtaatgatctcaagaaaaaagaatacaaagtgatgtaagaacgcac 2503 Query: 285 acagtattacgagtatgtgaaaaacaagaagaacctgaatctagcggatccccgtctgta 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2502 acagtattacgagtatgtgaaaaacaagaagaacctgaatctagcggatccccgtctgta 2443 Query: 345 gttttattactgtattacaacttgtagcttgttgccggaagttccttgccatgggaaacg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2442 gttttattactgtattacaacttgtagcttgttgccggaagttccttgccatgggaaacg 2383 Query: 405 ttacgttacgtcttttctcatattgccatgtaaaacaaggtactgcctttgtttttcccg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2382 ttacgttacgtcttttctcatattgccatgtaaaacaaggtactgcctttgtttttcccg 2323 Query: 465 tctttcttttctttttgaattggcttaggcatttctagtccaatacgtttgtgcttgcga 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2322 tctttcttttctttttgaattggcttaggcatttctagtccaatacgtttgtgcttgcga 2263 Query: 525 atgcaatacgtagtttcatgcacatcgaagtttaatccacctgaatcgcctgcgtaatca 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2262 atgcaatacgtagtttcatgcacatcgaagtttaatccacctgaatcgcctgcgtaatca 2203 Query: 585 tgtacggataaaaataaatacacactattatacaatcagataaatatttgactaatactg 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2202 tgtacggataaaaataaatacacactattatacaatcagataaatatttgactaatactg 2143 Query: 645 gtatgtatgcatatatatatatacactatatatatatatatagtgtatacataaagtgta 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2142 gtatgtatgcatatatatatatacactatatatatatatatagtgtatacataaagtgta 2083 Query: 705 tatgtcctttgtgggtgatagcaacaagttggactatattgtatataattgatccagatt 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2082 tatgtcctttgtgggtgatagcaacaagttggactatattgtatataattgatccagatt 2023 Query: 765 tcaagctgantagtacgatangaggggataataaacagctgttagcctatatatattcta 824 ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2022 tcaagctgataagtacgatagagggggataataaacagctgttagcctatatatattcta 1963 Query: 825 ttccatacactttcagcgccggggtctttcctttttgttactattttgcctttttggttt 884 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 1962 ttccatacactttcagcgccggtttctttcctttttgttactattttgccttttt-gttt 1904 Query: 885 agggtatttcaccaaagaagtt 906 || ||||||||||| ||||||| Sbjct: 1903 agtgtatttcaccagagaagtt 1882 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,300 Number of Sequences: 1807 Number of extensions: 14300 Number of successful extensions: 1312 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)