BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZE04RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1605 1576 0.0 >3x_Contig1605 Length = 12373 Score = 1576 bits (795), Expect = 0.0 Identities = 854/867 (98%), Gaps = 7/867 (0%) Strand = Plus / Minus Query: 48 ctttaggtatttgacttttttctttgaacttttagcaacttcgtgtttatccaattggtc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10988 ctttaggtatttgacttttttctttgaacttttagcaacttcgtgtttatccaattggtc 10929 Query: 108 tctagaattggattgatacggtaccgacccaagccttctgaatacattcctgtattcaga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10928 tctagaattggattgatacggtaccgacccaagccttctgaatacattcctgtattcaga 10869 Query: 168 atattctaaccaacagttccatttgatacctcgcttatcccaaatacatcttttggccaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10868 atattctaaccaacagttccatttgatacctcgcttatcccaaatacatcttttggccaa 10809 Query: 228 tgcatccagtctggtaattgaatcatgggtcgggatcgttttgatgttgctattcatgat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10808 tgcatccagtctggtaattgaatcatgggtcgggatcgttttgatgttgctattcatgat 10749 Query: 288 tgcacggcatttagcgatccaataattcatcacaacatgccctcccgtatgctctttaag 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10748 tgcacggcatttagcgatccaataattcatcacaacatgccctcccgtatgctctttaag 10689 Query: 348 attgataaggagcatctgatatactctgctgaactccgaactatatccctgcctgacaag 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10688 attgataaggagcatctgatatactctgctgaactccgaactatatccctgcctgacaag 10629 Query: 408 acatttgaaaagaaggtcataacaatggagagttggttcaacttcaaacgttgctttaaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10628 acatttgaaaagaaggtcataacaatggagagttggttcaacttcaaacgttgctttaaa 10569 Query: 468 ggtgttcactgtcataatacacatgtccattctgcctttttcggagaactgccttagata 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10568 ggtgttcactgtcataatacacatgtccattctgcctttttcggagaactgccttagata 10509 Query: 528 ctcttcaaggaaaaaaggatctttcacgcgaaaatttaagtgtcttgcatactccataag 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10508 ctcttcaaggaaaaaaggatctttcacgcgaaaatttaagtgtcttgcatactccataag 10449 Query: 588 cttccaggaggcctggaacttgtcccttttgattaatgaccggtggcatatcttgatgat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10448 cttccaggaggcctggaacttgtcccttttgattaatgaccggtggcatatcttgatgat 10389 Query: 648 ttttgtatcaacaggaatatcattctctcgtaaaaagtctattatgacattgaaaggaat 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388 ttttgtatcaacaggaatatcattctctcgtaaaaagtctattatgacattgaaaggaat 10329 Query: 708 gtcttcctcttctaggattccgtataatagatggtatgttaaaggaaactcctctt--ca 765 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 10328 gtcttcctcttctaggattccgtataatagatggtatgttaaagg-aactcctctttcaa 10270 Query: 766 ccattttctct-aaaatatagctcttgatatattatccttcaaaag-aaataacaggtg- 822 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10269 ccattttctctaaaaatatagctcttgatatattatccttcaaaagaaaataacaggtgt 10210 Query: 823 tcccagntatcacatctgcagatatattctcttttttcatccttnccagattaaatattg 882 ||| || ||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 10209 tccaagttatcacatctgcagatatattctcttttttcatcctttccagataaaatattg 10150 Query: 883 cttcgcgatatggggagntgttgttta 909 ||||||||||| ||||| ||||||||| Sbjct: 10149 cttcgcgatat-gggagttgttgttta 10124 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7245 Number of Sequences: 1807 Number of extensions: 7245 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)