BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZE06RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1650 1635 0.0 >3x_Contig1650 Length = 11257 Score = 1635 bits (825), Expect = 0.0 Identities = 872/884 (98%), Gaps = 3/884 (0%) Strand = Plus / Minus Query: 46 agatggtaattataatgtggaactgttgaagaagaaggacgcaagaacgaaaaaatttga 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7092 agatggtaattataatgtggaactgttgaagaagaaggacgcaagaacgaaaaaatttga 7033 Query: 106 aagaatgaaagccgttaccaatcaacctgtattaccaacaattcagagtactgaactaac 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7032 aagaatgaaagccgttaccaatcaacctgtattaccaacaattcagagtactgaactaac 6973 Query: 166 accattaacgctaacaatggcaaacgataacagattgttgaataaaactctacaggaaga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6972 accattaacgctaacaatggcaaacgataacagattgttgaataaaactctacaggaaga 6913 Query: 226 agaaacttctgctaacagtggtcgaccaacctcgaacagaacaagctcaaagaatttatt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6912 agaaacttctgctaacagtggtcgaccaacctcgaacagaacaagctcaaagaatttatt 6853 Query: 286 cagtatcaacaagcagcataacacatcttcctctacctctggcttttttaaactcaaaaa 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6852 cagtatcaacaagcagcataacacatcttcctctacctctggcttttttaaactcaaaaa 6793 Query: 346 ttcctcaaaatcttctctcaacaatggccagaaatctcctaaacttgggagtttatccaa 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6792 ttcctcaaaatcttctctcaacaatggccagaaatctcctaaacttgggagtttatccaa 6733 Query: 406 accatcaaataacgtttctggaaataacagttacaaagatctctttgctggttcctacta 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6732 accatcaaataacgtttctggaaataacagttacaaagatctctttgctggttcctacta 6673 Query: 466 taaatataaggtatggagaagacaacaaatgtcattcatcaataaacacgagaggatgtt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6672 taaatataaggtatggagaagacaacaaatgtcattcatcaataaacacgagaggatgtt 6613 Query: 526 ggtcattgatggtgactacgtttatataagtgggcctgatggtgatttcaattggacaca 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6612 ggtcattgatggtgactacgtttatataagtgggcctgatggtgatttcaattggacaca 6553 Query: 586 cgaaaacgtcaagacgaaatcgttccatataagccaaattaccctggtgaaaaggtctaa 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6552 cgaaaacgtcaagacgaaatcgttccatataagccaaattaccctggtgaaaaggtctaa 6493 Query: 646 gcgcgttccagaatatttcaagatttttgttcacagacctgatagagaacggagatatta 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6492 gcgcgttccagaatatttcaagatttttgttcacagacctgatagagaacggagatatta 6433 Query: 706 tttcgaagctgtgtcggctgaagaatgtgtggaaatcattactaggttgcaaaaccttat 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6432 tttcgaagctgtgtcggctgaagaatgtgtggaaatcattactaggttgcaaaaccttat 6373 Query: 766 tagagtgtacagaatgaatcataagttgacaatttgcgaaagaaatgatagatatgccac 825 ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| || Sbjct: 6372 tagagtgtacagaatgaatcaaaagtgaacaa-ttgcgaaagaaatgatagatatgcaac 6314 Query: 826 aaactgcatacagtatataccttagggtgctttgaatttaaaattaattgtaaagnaata 885 |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 6313 aaactgcatacagtatatacctcagggtgc-ttgtatttaaaattaattgtaaagaaata 6255 Query: 886 tgcttatatttttagatctctttgcgatattttgaatccatgaa 929 |||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 6254 tgcttata-ttctagatctctttgcgatattctgaatccatgaa 6212 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8603 Number of Sequences: 1807 Number of extensions: 8603 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)