BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZE06RM1.SCF screened BAC_end
         (951 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1650                                                        1635   0.0  

>3x_Contig1650 
          Length = 11257

 Score = 1635 bits (825), Expect = 0.0
 Identities = 872/884 (98%), Gaps = 3/884 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   agatggtaattataatgtggaactgttgaagaagaaggacgcaagaacgaaaaaatttga 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7092 agatggtaattataatgtggaactgttgaagaagaaggacgcaagaacgaaaaaatttga 7033

                                                                        
Query: 106  aagaatgaaagccgttaccaatcaacctgtattaccaacaattcagagtactgaactaac 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7032 aagaatgaaagccgttaccaatcaacctgtattaccaacaattcagagtactgaactaac 6973

                                                                        
Query: 166  accattaacgctaacaatggcaaacgataacagattgttgaataaaactctacaggaaga 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6972 accattaacgctaacaatggcaaacgataacagattgttgaataaaactctacaggaaga 6913

                                                                        
Query: 226  agaaacttctgctaacagtggtcgaccaacctcgaacagaacaagctcaaagaatttatt 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6912 agaaacttctgctaacagtggtcgaccaacctcgaacagaacaagctcaaagaatttatt 6853

                                                                        
Query: 286  cagtatcaacaagcagcataacacatcttcctctacctctggcttttttaaactcaaaaa 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6852 cagtatcaacaagcagcataacacatcttcctctacctctggcttttttaaactcaaaaa 6793

                                                                        
Query: 346  ttcctcaaaatcttctctcaacaatggccagaaatctcctaaacttgggagtttatccaa 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6792 ttcctcaaaatcttctctcaacaatggccagaaatctcctaaacttgggagtttatccaa 6733

                                                                        
Query: 406  accatcaaataacgtttctggaaataacagttacaaagatctctttgctggttcctacta 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6732 accatcaaataacgtttctggaaataacagttacaaagatctctttgctggttcctacta 6673

                                                                        
Query: 466  taaatataaggtatggagaagacaacaaatgtcattcatcaataaacacgagaggatgtt 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6672 taaatataaggtatggagaagacaacaaatgtcattcatcaataaacacgagaggatgtt 6613

                                                                        
Query: 526  ggtcattgatggtgactacgtttatataagtgggcctgatggtgatttcaattggacaca 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6612 ggtcattgatggtgactacgtttatataagtgggcctgatggtgatttcaattggacaca 6553

                                                                        
Query: 586  cgaaaacgtcaagacgaaatcgttccatataagccaaattaccctggtgaaaaggtctaa 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6552 cgaaaacgtcaagacgaaatcgttccatataagccaaattaccctggtgaaaaggtctaa 6493

                                                                        
Query: 646  gcgcgttccagaatatttcaagatttttgttcacagacctgatagagaacggagatatta 705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6492 gcgcgttccagaatatttcaagatttttgttcacagacctgatagagaacggagatatta 6433

                                                                        
Query: 706  tttcgaagctgtgtcggctgaagaatgtgtggaaatcattactaggttgcaaaaccttat 765
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6432 tttcgaagctgtgtcggctgaagaatgtgtggaaatcattactaggttgcaaaaccttat 6373

                                                                        
Query: 766  tagagtgtacagaatgaatcataagttgacaatttgcgaaagaaatgatagatatgccac 825
            ||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||| ||
Sbjct: 6372 tagagtgtacagaatgaatcaaaagtgaacaa-ttgcgaaagaaatgatagatatgcaac 6314

                                                                        
Query: 826  aaactgcatacagtatataccttagggtgctttgaatttaaaattaattgtaaagnaata 885
            |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||||
Sbjct: 6313 aaactgcatacagtatatacctcagggtgc-ttgtatttaaaattaattgtaaagaaata 6255

                                                        
Query: 886  tgcttatatttttagatctctttgcgatattttgaatccatgaa 929
            |||||||| || ||||||||||||||||||| ||||||||||||
Sbjct: 6254 tgcttata-ttctagatctctttgcgatattctgaatccatgaa 6212


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8603
Number of Sequences: 1807
Number of extensions: 8603
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)