BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZE07RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig923 1544 0.0 >3x_Contig923 Length = 2348 Score = 1544 bits (779), Expect = 0.0 Identities = 835/852 (98%), Gaps = 2/852 (0%) Strand = Plus / Plus Query: 45 tggcagctttctttagatgatccagtggaggagtattagctagttctgttaatttgtgat 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 tggcagctttctttagatgatccagtggaggagtattagctagttctgttaatttgtgat 165 Query: 105 actcagtggtgcgtataggtgttatggactttctttccgccaaccacagcaataaagact 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 actcagtggtgcgtataggtgttatggactttctttccgccaaccacagcaataaagact 225 Query: 165 ccatatcgtcactagaaagcgatgattgaatagcttcaattgaaggatgagtgtttccat 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 ccatatcgtcactagaaagcgatgattgaatagcttcaattgaaggatgagtgtttccat 285 Query: 225 gcattagtctggtgtgctcctcatttggaagaagaacatgatcttttgacttagcacatt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 gcattagtctggtgtgctcctcatttggaagaagaacatgatcttttgacttagcacatt 345 Query: 285 ctttcaacctattaatatctggactttcagctttgcatttcagatcaattagatccttat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 ctttcaacctattaatatctggactttcagctttgcatttcagatcaattagatccttat 405 Query: 345 caggtattaccgagagtttgtgatttgcagcaattttttccactttatcgatagaaggat 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 caggtattaccgagagtttgtgatttgcagcaattttttccactttatcgatagaaggat 465 Query: 405 tcagtagctcatggtaatctttgttagatattaaaatatggtcgtgagtggtagctaact 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tcagtagctcatggtaatctttgttagatattaaaatatggtcgtgagtggtagctaact 525 Query: 465 gttggacgtcttcgatacttggttcagtgagttgggacaatttactcttcgttagtacag 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 gttggacgtcttcgatacttggttcagtgagttgggacaatttactcttcgttagtacag 585 Query: 525 ttaatccttttgcatctgctttggcctgcaaatattcttcagacgggctttccaatttag 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 ttaatccttttgcatctgctttggcctgcaaatattcttcagacgggctttccaatttag 645 Query: 585 cttttatatcagtcaattgtgactgtttcaatacctgaagtcctctggactgggcatggt 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 cttttatatcagtcaattgtgactgtttcaatacctgaagtcctctggactgggcatggt 705 Query: 645 ttgttaatgcctcaacatcccgtttcctcaaattttcatactcatcaatgtcgataatgg 704 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 706 ttgttaatgcctcaacatccggtttcctcaaattttcatactcatcaatgtcgataatgg 765 Query: 705 ttttttgaagcttgtgagccttactctcgagatatgacagggacggacttttcgaagcat 764 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 766 ttttttgaagcttgtgagccttactctcgagatatgacagggacggactttcggaagcat 825 Query: 765 gaagcanattctcatagtcctttttacttaacgcagngtagnctttactttct-atgatt 823 |||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 826 gaagcaaattctcatagtcctttttacttaacgcagtgtagtctttactttctaatgatt 885 Query: 824 tttt-aaagtttccatcgatggatcacttcatgattgggacccttcttccttgaatgcag 882 |||| ||||||||||||||||||||| | |||||||| || ||||||| |||| |||| Sbjct: 886 ttttcaaagtttccatcgatggatcattcaatgattggtactcttcttctttgatagcag 945 Query: 883 tgaagttgagcc 894 ||| |||||||| Sbjct: 946 tgaggttgagcc 957 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6061 Number of Sequences: 1807 Number of extensions: 6061 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)