BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZE10RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1562 1011 0.0 >3x_Contig1562 Length = 11773 Score = 1011 bits (510), Expect = 0.0 Identities = 570/583 (97%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 327 acaccagtaacatctttacctaaagacaataaaacgtaagtatcctgaacagaaattacc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acaccagtaacatctttacctaaagacaataaaacgtaagtatcctgaacagaaattacc 60 Query: 387 ctagcaggtagaacatcgccttctttaatttctgaaatagaggagatggcgtgcgatcta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctagcaggtagaacatcgccttctttaatttctgaaatagaggagatggcgtgcgatcta 120 Query: 447 gcagaaacaactagtgaatcatgctcagtatcaatagatttgacggttactctgacagct 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcagaaacaactagtgaatcatgctcagtatcaatagatttgacggttactctgacagct 180 Query: 507 gtacctattgggtatttctcttcaattggtaaggaaaagtcatgaccttcatctgagatc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtacctattgggtatttctcttcaattggtaaggaaaagtcatgaccttcatctgagatc 240 Query: 567 tcaaagattggtagtttggccttgacagtaggagtgatagtcaaccatgcggtatcgttg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcaaagattggtagtttggccttgacagtaggagtgatagtcaaccatgcggtatcgttg 300 Query: 627 ctataattattaatgaatccaaaggttgtttgctctggagtgaagtccttgagtttcttt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctataattattaatgaatccaaaggttgtttgctctggagtgaagtccttgagtttcttt 360 Query: 687 tcggaaactggagaagttaatgaagatggctttgcgctcagttcgactagatggctcttg 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tcggaaactggagaagttaatgaagatggctttgcgctcagttcgactagatggctcttg 420 Query: 747 gatgttgtgtgagaaattggtaagaaattacggcttttaatatcgtgggacccgattact 806 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| Sbjct: 421 gatgttgtgtgagaaattggtaagaatttacggcttttaatatcgtggaacccgataact 480 Query: 807 ctgactgagagtgaatcattttttcttgtacacacttnaatggngcccttntgnntcttt 866 |||||||||||||||||| |||||||||||||||||| ||||| | |||| || ||||| Sbjct: 481 ctgactgagagtgaatca-tttttcttgtacacactt-aatggtg-ccttttg-ttcttt 536 Query: 867 gataatcttcgaaactgtcgaaaactttcaaaaatactgatac 909 ||| ||||||||||||||||||||| |||| |||||||||||| Sbjct: 537 gat-atcttcgaaactgtcgaaaac-ttcagaaatactgatac 577 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7435 Number of Sequences: 1807 Number of extensions: 7435 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)