BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZE11FM1.SCF screened BAC_end
         (925 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig720                                                         1560   0.0  

>3x_Contig720 
          Length = 2178

 Score = 1560 bits (787), Expect = 0.0
 Identities = 825/837 (98%), Gaps = 1/837 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   attccattgtttcgaggatagcttgattttatcttcaaacagcattttcgattacttcaa 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 attccattgtttcgaggatagcttgattttatcttcaaacagcattttcgattacttcaa 1023

                                                                        
Query: 148  accgaaaaccattgtgccttttttcactgttctgacctaatatacgttatctgctctatc 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 accgaaaaccattgtgccttttttcactgttctgacctaatatacgttatctgctctatc 963

                                                                        
Query: 208  ataaaaccggttgttaatattcgcaggattcataggaagcgggacagtgctaataataat 267
            ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  ataaaaccggtggctaatattcgcaggattcataggaagcgggacagtgctaataataat 903

                                                                        
Query: 268  accattaagatatatcagctgttaccatgtcttcggttattcttcctccacaagctccag 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  accattaagatatatcagctgttaccatgtcttcggttattcttcctccacaagctccag 843

                                                                        
Query: 328  ttgagcgtttgaacagaactgctagtttcaggactttggaaagagaatcaagatttatta 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  ttgagcgtttgaacagaactgctagtttcaggactttggaaagagaatcaagatttatta 783

                                                                        
Query: 388  atcctccaaaggataaatctgcatacccattcctagcggacgctgtacagccacacattg 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  atcctccaaaggataaatctgcatacccattcctagcggacgctgtacagccacacattg 723

                                                                        
Query: 448  gctccttcaatgcattgactgagggacctgatggtggtttgttaaacctaggggcaaaag 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722  gctccttcaatgcattgactgagggacctgatggtggtttgttaaacctaggggcaaaag 663

                                                                        
Query: 508  atattggatccaaagttattttcgatggtaagggatcggacactaacccaaactacttgg 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  atattggatccaaagttattttcgatggtaagggatcggacactaacccaaactacttgg 603

                                                                        
Query: 568  gtaacaaattatctttgagtattgaacaggtgtctatttctaaaccaacttctaacgatg 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  gtaacaaattatctttgagtattgaacaggtgtctatttctaaaccaacttctaacgatg 543

                                                                        
Query: 628  gtgtttcttctgcagtagaacgcaaggttttcccatctgaatccagacagagattgactt 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542  gtgtttcttctgcagtagaacgcaaggttttcccatctgaatccagacagagattgactt 483

                                                                        
Query: 688  catacagagggaaaattttgctgaagttgaaatggtcggtcaatgatggtgaagaaactt 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482  catacagagggaaaattttgctgaagttgaaatggtcggtcaatgatggtgaagaaactt 423

                                                                        
Query: 748  ttactgaagtaagagactgtggtggtttgccaatcatgcttcagtccaatagatgtcatt 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  ttactgaagtaagagactgtggtggtttgccaatcatgcttcagtccaatagatgtcatt 363

                                                                        
Query: 808  tggacaagatgtcttcatacgaattagtcggacatagggaaaaatctgatgaanttggng 867
            || ||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||| |
Sbjct: 362  tgaacaagatgtctccatacgaattagtcgaacatagggaagaatctgatgaatttggtg 303

                                                                     
Query: 868  gttacttcatttgttaatggtatcgaaaaatggatcagaatgtttattgtgccacgt 924
            ||||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||
Sbjct: 302  gttacttca-ttgttaatggtatcgaaaaattgatcagaatgttaattgtgcaacgt 247


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6541
Number of Sequences: 1807
Number of extensions: 6541
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)