BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZE11FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig720 1560 0.0 >3x_Contig720 Length = 2178 Score = 1560 bits (787), Expect = 0.0 Identities = 825/837 (98%), Gaps = 1/837 (0%) Strand = Plus / Minus Query: 88 attccattgtttcgaggatagcttgattttatcttcaaacagcattttcgattacttcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 attccattgtttcgaggatagcttgattttatcttcaaacagcattttcgattacttcaa 1023 Query: 148 accgaaaaccattgtgccttttttcactgttctgacctaatatacgttatctgctctatc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 accgaaaaccattgtgccttttttcactgttctgacctaatatacgttatctgctctatc 963 Query: 208 ataaaaccggttgttaatattcgcaggattcataggaagcgggacagtgctaataataat 267 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ataaaaccggtggctaatattcgcaggattcataggaagcgggacagtgctaataataat 903 Query: 268 accattaagatatatcagctgttaccatgtcttcggttattcttcctccacaagctccag 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 accattaagatatatcagctgttaccatgtcttcggttattcttcctccacaagctccag 843 Query: 328 ttgagcgtttgaacagaactgctagtttcaggactttggaaagagaatcaagatttatta 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 ttgagcgtttgaacagaactgctagtttcaggactttggaaagagaatcaagatttatta 783 Query: 388 atcctccaaaggataaatctgcatacccattcctagcggacgctgtacagccacacattg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 atcctccaaaggataaatctgcatacccattcctagcggacgctgtacagccacacattg 723 Query: 448 gctccttcaatgcattgactgagggacctgatggtggtttgttaaacctaggggcaaaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 gctccttcaatgcattgactgagggacctgatggtggtttgttaaacctaggggcaaaag 663 Query: 508 atattggatccaaagttattttcgatggtaagggatcggacactaacccaaactacttgg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 atattggatccaaagttattttcgatggtaagggatcggacactaacccaaactacttgg 603 Query: 568 gtaacaaattatctttgagtattgaacaggtgtctatttctaaaccaacttctaacgatg 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 gtaacaaattatctttgagtattgaacaggtgtctatttctaaaccaacttctaacgatg 543 Query: 628 gtgtttcttctgcagtagaacgcaaggttttcccatctgaatccagacagagattgactt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gtgtttcttctgcagtagaacgcaaggttttcccatctgaatccagacagagattgactt 483 Query: 688 catacagagggaaaattttgctgaagttgaaatggtcggtcaatgatggtgaagaaactt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 catacagagggaaaattttgctgaagttgaaatggtcggtcaatgatggtgaagaaactt 423 Query: 748 ttactgaagtaagagactgtggtggtttgccaatcatgcttcagtccaatagatgtcatt 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 ttactgaagtaagagactgtggtggtttgccaatcatgcttcagtccaatagatgtcatt 363 Query: 808 tggacaagatgtcttcatacgaattagtcggacatagggaaaaatctgatgaanttggng 867 || ||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||| | Sbjct: 362 tgaacaagatgtctccatacgaattagtcgaacatagggaagaatctgatgaatttggtg 303 Query: 868 gttacttcatttgttaatggtatcgaaaaatggatcagaatgtttattgtgccacgt 924 ||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||| Sbjct: 302 gttacttca-ttgttaatggtatcgaaaaattgatcagaatgttaattgtgcaacgt 247 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6541 Number of Sequences: 1807 Number of extensions: 6541 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)