BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZF01FM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1059                                                        1544   0.0  

>3x_Contig1059 
          Length = 3822

 Score = 1544 bits (779), Expect = 0.0
 Identities = 821/831 (98%), Gaps = 3/831 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   accgtttctggtttcaccttgctcatgtttgaaactttccttcaataatgccaagtcttc 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 accgtttctggtttcaccttgctcatgtttgaaactttccttcaataatgccaagtcttc 1271

                                                                        
Query: 148  ttgaatagtctttaagttaatagcattttctggagtgtaaacagagacagcaccggtaac 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 ttgaatagtctttaagttaatagcattttctggagtgtaaacagagacagcaccggtaac 1331

                                                                        
Query: 208  tagcccagtgaaagatgcaacgtaaccggagtgtccaccttgaacctcaacaacgaacac 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 tagcccagtgaaagatgcaacgtaaccggagtgtccaccttgaacctcaacaacgaacac 1391

                                                                        
Query: 268  tctacgtctggtagatgatgcagattgtttgatagcatcggtgtacttcactaacgcatt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 tctacgtctggtagatgatgcagattgtttgatagcatcggtgtacttcactaacgcatt 1451

                                                                        
Query: 328  caaacaggtatcggaacccaaagagtattctgtaccaggcacgttgttggacacggtggc 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 caaacaggtatcggaacccaaagagtattctgtaccaggcacgttgttggacacggtggc 1511

                                                                        
Query: 388  tgggatcaaacacattggaatgttgaagattggatattggtcacgaccatctcttaattg 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 tgggatcaaacacattggaatgttgaagattggatattggtcacgaccatctcttaattg 1571

                                                                        
Query: 448  cttcaaagacttgaaaccttcaaatccaccaaggatgatgacaccatcaaacttgttctt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 cttcaaagacttgaaaccttcaaatccaccaaggatgatgacaccatcaaacttgttctt 1631

                                                                        
Query: 508  ttggaaatggtatgcgatagtacccatatcttctgctgcgacggatctattggtaccaat 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1632 ttggaaatggtatgcgatagtacccatatcttctgctgcgacggatctattggtaccaat 1691

                                                                        
Query: 568  ttctgacccaccgaggttatgccagtcttcaacatcgatccaggaaagttctttcacttg 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1692 ttctgacccaccgaggttatgccagtcttcaacatcgatccaggaaagttctttcacttg 1751

                                                                        
Query: 628  acctgtttgtattagaccactgaaaccatttgtaatagcatatggtctatgaccatgagc 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1752 acctgtttgtattagaccactgaaaccatttgtaatagcatatggtctatgaccatgagc 1811

                                                                        
Query: 688  tagacagtataatgttgctgctctagtggctgcgttcaaagcagcagaaggtgcaccaac 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 tagacagtataatgttgctgctctagtggctgcgttcaaagcagcagaaggtgcaccaac 1871

                                                                        
Query: 748  gtgaacaatggcgatgttcaatctgtctgcttcaagcaatagctgagatccatcatcatt 807
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1872 gtgaacaatggcgatgttcaatctgtctgcttcaggcaatagctgagatccatcatcatt 1931

                                                                        
Query: 808  aacggtggtggacatgaagttggaattacaattc-atgaactctgtgtcacgtaaagaaa 866
            ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1932 aacggtggtggacatgaagttggaa-tacaattcaatgaactctgtgtcacgtaaagaaa 1990

                                                               
Query: 867  ggcttttattgaaa-ctttagcttcgatgggtgcaacaacttgttttgtga 916
             |  ||||| |||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 1991 tggctttatcgaaatctttagcttcgatggctgcagcaacttgttttgtga 2041


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6385
Number of Sequences: 1807
Number of extensions: 6385
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)