BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZF01FM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1059 1544 0.0 >3x_Contig1059 Length = 3822 Score = 1544 bits (779), Expect = 0.0 Identities = 821/831 (98%), Gaps = 3/831 (0%) Strand = Plus / Plus Query: 88 accgtttctggtttcaccttgctcatgtttgaaactttccttcaataatgccaagtcttc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 accgtttctggtttcaccttgctcatgtttgaaactttccttcaataatgccaagtcttc 1271 Query: 148 ttgaatagtctttaagttaatagcattttctggagtgtaaacagagacagcaccggtaac 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 ttgaatagtctttaagttaatagcattttctggagtgtaaacagagacagcaccggtaac 1331 Query: 208 tagcccagtgaaagatgcaacgtaaccggagtgtccaccttgaacctcaacaacgaacac 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 tagcccagtgaaagatgcaacgtaaccggagtgtccaccttgaacctcaacaacgaacac 1391 Query: 268 tctacgtctggtagatgatgcagattgtttgatagcatcggtgtacttcactaacgcatt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 tctacgtctggtagatgatgcagattgtttgatagcatcggtgtacttcactaacgcatt 1451 Query: 328 caaacaggtatcggaacccaaagagtattctgtaccaggcacgttgttggacacggtggc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1452 caaacaggtatcggaacccaaagagtattctgtaccaggcacgttgttggacacggtggc 1511 Query: 388 tgggatcaaacacattggaatgttgaagattggatattggtcacgaccatctcttaattg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 tgggatcaaacacattggaatgttgaagattggatattggtcacgaccatctcttaattg 1571 Query: 448 cttcaaagacttgaaaccttcaaatccaccaaggatgatgacaccatcaaacttgttctt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1572 cttcaaagacttgaaaccttcaaatccaccaaggatgatgacaccatcaaacttgttctt 1631 Query: 508 ttggaaatggtatgcgatagtacccatatcttctgctgcgacggatctattggtaccaat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1632 ttggaaatggtatgcgatagtacccatatcttctgctgcgacggatctattggtaccaat 1691 Query: 568 ttctgacccaccgaggttatgccagtcttcaacatcgatccaggaaagttctttcacttg 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 ttctgacccaccgaggttatgccagtcttcaacatcgatccaggaaagttctttcacttg 1751 Query: 628 acctgtttgtattagaccactgaaaccatttgtaatagcatatggtctatgaccatgagc 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1752 acctgtttgtattagaccactgaaaccatttgtaatagcatatggtctatgaccatgagc 1811 Query: 688 tagacagtataatgttgctgctctagtggctgcgttcaaagcagcagaaggtgcaccaac 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1812 tagacagtataatgttgctgctctagtggctgcgttcaaagcagcagaaggtgcaccaac 1871 Query: 748 gtgaacaatggcgatgttcaatctgtctgcttcaagcaatagctgagatccatcatcatt 807 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1872 gtgaacaatggcgatgttcaatctgtctgcttcaggcaatagctgagatccatcatcatt 1931 Query: 808 aacggtggtggacatgaagttggaattacaattc-atgaactctgtgtcacgtaaagaaa 866 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1932 aacggtggtggacatgaagttggaa-tacaattcaatgaactctgtgtcacgtaaagaaa 1990 Query: 867 ggcttttattgaaa-ctttagcttcgatgggtgcaacaacttgttttgtga 916 | ||||| |||| ||||||||||||||| |||| ||||||||||||||| Sbjct: 1991 tggctttatcgaaatctttagcttcgatggctgcagcaacttgttttgtga 2041 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6385 Number of Sequences: 1807 Number of extensions: 6385 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)