BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZF02FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1735                                                        1421   0.0  

>3x_Contig1735 
          Length = 19486

 Score = 1421 bits (717), Expect = 0.0
 Identities = 793/811 (97%), Gaps = 6/811 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    tccttgtactgttgttctaatgaatcagtagagtaactagagtttgattggattgatgac 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16133 tccttgtactgttgttctaatgaatcagtagagtaactagagtttgattggattgatgac 16074

                                                                         
Query: 147   gcaccaataatacgtttgaattgcgtagcagatagttgcgaggccgatcttttaacaaca 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16073 gcaccaataatacgtttgaattgcgtagcagatagttgcgaggccgatcttttaacaaca 16014

                                                                         
Query: 207   cgggtccagctttttatcatgtgtccgaaaaattacctggatagattcacaagttgtgtt 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16013 cgggtccagctttttatcatgtgtccgaaaaattacctggatagattcacaagttgtgtt 15954

                                                                         
Query: 267   gataggtatcctctttcaactagtgaacttactctctacagtaacctatttccagtgaat 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15953 gataggtatcctctttcaactagtgaacttactctctacagtaacctatttccagtgaat 15894

                                                                         
Query: 327   tcttccgtatctcattaaagttggtaatagtaactttgttccaatatcacttttcataac 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15893 tcttccgtatctcattaaagttggtaatagtaactttgttccaatatcacttttcataac 15834

                                                                         
Query: 387   ttttaaagaaaaaggtaaattctaatcagcgtataccggttcagataagatacatgcaag 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15833 ttttaaagaaaaaggtaaattctaatcagcgtataccggttcagataagatacatgcaag 15774

                                                                         
Query: 447   aagaaattgagaggatgagaaatatgagttaggtgtgacttgaaacagtatattgtcaca 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15773 aagaaattgagaggatgagaaatatgagttaggtgtgacttgaaacagtatattgtcaca 15714

                                                                         
Query: 507   ctgaattgcggtgtgaagttatcacaccttgatacttcccttttctgctactttttaata 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15713 ctgaattgcggtgtgaagttatcacaccttgatacttcccttttctgctactttttaata 15654

                                                                         
Query: 567   tcgaaatctaacctacatgtcacacatatattcgcattctaatttggatgaactcttggt 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15653 tcgaaatctaacctacatgtcacacatatattcgcattctaatttggatgaactcttggt 15594

                                                                         
Query: 627   gtctcttttgggagaatacaagccacatcttcaaacacatagccataggatgaaatcatg 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593 gtctcttttgggagaatacaagccacatcttcaaacacatagccataggatgaaatcatg 15534

                                                                         
Query: 687   gaacactttgctcaaggagttttataggcgatctggattaaattacaggcaaactaggac 746
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15533 gaacactttgctcaaggagtttaataggcgatctggattaaattacaggcaaactaggac 15474

                                                                         
Query: 747   attgaaaaggaggttnngatagctttgttctg-gtatcttaaa-atggtagcgtgaaggt 804
             |||||||||||||||     ||||||||||||  ||||||||| ||||||||||||||||
Sbjct: 15473 attgaaaaggaggtttgataagctttgttctgtttatcttaaatatggtagcgtgaaggt 15414

                                                                         
Query: 805   -acgaatttcg-aacctttaaacagtt-gtatttgaattccagcttgaacgtcaaaaatt 861
              |||||||||| |||||| |||||||| |||||||||||| ||| |||||||||||||| 
Sbjct: 15413 aacgaatttcgaaaccttcaaacagttggtatttgaattcgagcatgaacgtcaaaaatc 15354

                                            
Query: 862   tgatagtactgccactggat-aagtaacgct 891
             ||||||||||||||||| || ||||||||||
Sbjct: 15353 tgatagtactgccactgaatcaagtaacgct 15323


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6200
Number of Sequences: 1807
Number of extensions: 6200
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)