BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZF03FM1.SCF screened BAC_end
         (959 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1523                                                        1443   0.0  

>3x_Contig1523 
          Length = 10049

 Score = 1443 bits (728), Expect = 0.0
 Identities = 838/860 (97%), Gaps = 11/860 (1%)
 Strand = Plus / Minus

                                                                        
Query: 86   aagaaagataagcatgaggtccggaaacaaagtcacgtgaacgttttttttcagttatag 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 aagaaagataagcatgaggtccggaaacaaagtcacgtgaacgttttttttcagttatag 2977

                                                                        
Query: 146  catacctttcttatgcatgcgtcacaaaatgatgacacgagctcttggttttgccttaaa 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2976 catacctttcttatgcatgcgtcacaaaatgatgacacgagctcttggttttgccttaaa 2917

                                                                        
Query: 206  agcatgacgcagccaaggcattgtaaatattctccctgagtatcatcgttgttgaataaa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2916 agcatgacgcagccaaggcattgtaaatattctccctgagtatcatcgttgttgaataaa 2857

                                                                        
Query: 266  tgatgaccgttatttagcattccgttatattcatctttcgtatagttcaatttaaaggtg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856 tgatgaccgttatttagcattccgttatattcatctttcgtatagttcaatttaaaggtg 2797

                                                                        
Query: 326  gaagtattcgactgaaatgtaattggtatgttcccatggtatattagaataggtggtaag 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2796 gaagtattcgactgaaatgtaattggtatgttcccatggtatattagaataggtggtaag 2737

                                                                        
Query: 386  ctggcactactagtttctttagtaattaatgtatccgttaacctctttgtattgtagctt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2736 ctggcactactagtttctttagtaattaatgtatccgttaacctctttgtattgtagctt 2677

                                                                        
Query: 446  tgtaaatgacaaccaaacgcaatcggcgtcgataaactaaagtttgccgccagcagttcc 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2676 tgtaaatgacaaccaaacgcaatcggcgtcgataaactaaagtttgccgccagcagttcc 2617

                                                                        
Query: 506  tctgaggttgggatataaggcatgagatccatttcccaaatctcattcttaagtgcgaca 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2616 tctgaggttgggatataaggcatgagatccatttcccaaatctcattcttaagtgcgaca 2557

                                                                        
Query: 566  atccttttttgttcttccacatggattatatcatcgtatgtatctcgaagctttgtcata 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2556 atccttttttgttcttccacatggattatatcatcgtatgtatctcgaagctttgtcata 2497

                                                                        
Query: 626  tcaggtaggttctctttgtctgaacttgaatcaacaataaatataacatcatttctgtct 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2496 tcaggtaggttctctttgtctgaacttgaatcaacaataaatataacatca-ttctgtct 2438

                                                                        
Query: 686  tccgctgataaataaagatctgagcggtatattttcaccatcttctccaccatttactag 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2437 tccgctgataaataaagatctgagcggtatattttcaccatcttctccaccatctactag 2378

                                                                        
Query: 746  aaatagctgagatgtgtcacttatcaaattcagaacttttggatctttataaaaagggtt 805
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2377 aaatagctgagatgtgtcacttatcaaattcagaacttctggatctttataaaaagggtt 2318

                                                                        
Query: 806  tgggtgggtatattgccgtaattagaatcgaatgggcattaaatcccacacccaaattca 865
            | ||| ||||||||| |||||| || ||||||| |||||||||||| ||| |||||| ||
Sbjct: 2317 t-ggttggtatattg-cgtaatcag-atcgaat-ggcattaaatccaaca-ccaaataca 2263

                                                                        
Query: 866  ccaaagattggtttttattggcttttaacttttcgttgggattctaggtttggttggtac 925
            ||||||| ||||||||||| || |||||||| ||||| |||||||| |||| |||| |||
Sbjct: 2262 ccaaaga-tggtttttatt-gcctttaacttctcgtt-ggattctatgttt-gttgttac 2207

                                
Query: 926  cggttttccaaatttagaac 945
            | ||||||||||| ||||||
Sbjct: 2206 c-gttttccaaatatagaac 2188


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7029
Number of Sequences: 1807
Number of extensions: 7029
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)