BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZF06RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1355 1207 0.0 >3x_Contig1355 Length = 8652 Score = 1207 bits (609), Expect = 0.0 Identities = 664/681 (97%), Gaps = 1/681 (0%) Strand = Plus / Plus Query: 270 cacaaagagaaaacttcatgctttcttgtggtgacgataagacggtgaagctatggtcag 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cacaaagagaaaacttcatgctttcttgtggtgacgataagacggtgaagctatggtcag 60 Query: 330 tgaattctgacgacttttccaacgttaaagatgatacaagattgaatacagatgaaggta 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tgaattctgacgacttttccaacgttaaagatgatacaagattgaatacagatgaaggta 120 Query: 390 tcatcaaaacattccatggtgaacatgctttccaatctttggatcatcatagacaaaaat 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcatcaaaacattccatggtgaacatgctttccaatctttggatcatcatagacaaaaat 180 Query: 450 cgaattttgttactggtggtgcccaaatcgaactttgggatacaaacagatcaaagccaa 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cgaattttgttactggtggtgcccaaatcgaactttgggatacaaacagatcaaagccaa 240 Query: 510 tatcaaatctttcatggggtgcggacaatatcaatcatgttagatttaatcaaaatgagg 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tatcaaatctttcatggggtgcggacaatatcaatcatgttagatttaatcaaaatgagg 300 Query: 570 tcgacattttagcaagtacgggtagtgataactctgtggttctttatgacctaagaacaa 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcgacattttagcaagtacgggtagtgataactctgtggttctttatgacctaagaacaa 360 Query: 630 actctccaacacaaaaaattgttcaaaccatgaggacaaactctatctgttggaacccag 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 actctccaacacaaaaaattgttcaaaccatgaggacaaactctatctgttggaacccag 420 Query: 690 tggaagccttcaacttcgtaattgccaatgaagatcataatgcttattactatgatatga 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tggaagccttcaacttcgtaattgccaatgaagatcataatgcttattactatgatatga 480 Query: 750 gaaatatgtccaaagctttgcatgtgtttaaagatcatgttagtgctgttatggatgttg 809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gaaatatgtccaaagctttgcatgtgtttaaagatcatgttagtgctgttatggatgttg 540 Query: 810 atttttcccctactgttgacgaagttgttacatgcttctatgataagacattcagaattt 869 ||||||||||||||| |||||||||||| ||| ||| ||||||||||||| ||||||||| Sbjct: 541 atttttcccctactggtgacgaagttgtaacaggctcctatgataagacaatcagaattt 600 Query: 870 acaaagttaaacattgtcattcgaggagaatatttcttccaaagaggatgcagcatattt 929 || ||||||||||| |||||||||| ||||| || | ||||||| |||||||||| || Sbjct: 601 accaagttaaacatggtcattcgagagaaatatatcatacaaagagaatgcagcata-tt 659 Query: 930 ttccaggtgaaatttaccatg 950 ||||| ||||||| ||||||| Sbjct: 660 ttccaagtgaaatataccatg 680 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7411 Number of Sequences: 1807 Number of extensions: 7411 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)