BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZF11FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1431 1564 0.0 >3x_Contig1431 Length = 10954 Score = 1564 bits (789), Expect = 0.0 Identities = 827/837 (98%), Gaps = 2/837 (0%) Strand = Plus / Plus Query: 85 taactatcgaaaaaactcattacaatgcactttacggacttggaatgtgttgtgtcaaac 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3069 taactatcgaaaaaactcattacaatgcactttacggacttggaatgtgttgtgtcaaac 3128 Query: 145 ttggaaagtttgaagaagcactattattcttcgagaaggcaagagccttgaatccggtca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3129 ttggaaagtttgaagaagcactattattcttcgagaaggcaagagccttgaatccggtca 3188 Query: 205 atgtcattttgaattgttgctgcggcgttgcgttagaaagattacagcagccagagagag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3189 atgtcattttgaattgttgctgcggcgttgcgttagaaagattacagcagccagagagag 3248 Query: 265 ctttgaacttctacgaattagcaactgagttacaaccaaactcgtctttagcattgttca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3249 ctttgaacttctacgaattagcaactgagttacaaccaaactcgtctttagcattgttca 3308 Query: 325 agaaatcacaacttctattgaacatgggacagtattcttctgcgctacataattttgaaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3309 agaaatcacaacttctattgaacatgggacagtattcttctgcgctacataattttgaaa 3368 Query: 385 gattagaatcacttacccctgatgaagctcatgtgcactttttgcttggtaacctgtacc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3369 gattagaatcacttacccctgatgaagctcatgtgcactttttgcttggtaacctgtacc 3428 Query: 445 aaattgtgggtaagaagcaagatgcaatgaatcaatatactattgcaatgaacctagacc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3429 aaattgtgggtaagaagcaagatgcaatgaatcaatatactattgcaatgaacctagacc 3488 Query: 505 ctaaaggtagtcaattaataaaagaagccatggaaaaatgtcatgaacagggttgataaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3489 ctaaaggtagtcaattaataaaagaagccatggaaaaatgtcatgaacagggttgataaa 3548 Query: 565 tctgttatatatcgttacaaaaaatctacttgaaccttcaaccaaattctttcacacaac 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3549 tctgttatatatcgttacaaaaaatctacttgaaccttcaaccaaattctttcacacaac 3608 Query: 625 gtgtttttacagttatctatatagccttcaaaaatagcgtctcccagtgtatatgagtgt 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3609 gtgtttttacagttatctatatagccttcaaaaatagcgtctcccagtgtatatgagtgt 3668 Query: 685 tctcagatgatttgaagattataatattaatgataataatacagatagacgaaggactaa 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3669 tctcagatgatttgaagattataatattaatgataataatacagatagacgaaggactaa 3728 Query: 745 agatctacataaaaaatactacacagtcgacgaattttctttggagaatgatcagtgaag 804 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3729 agatctacataaaaaatactacacagtcgacgaa-tttctttggagaatgatcagtgaag 3787 Query: 805 atcaaatacgattactcatgaacttaggatccaggccaaaatatttctctccttgagttg 864 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3788 atcaaatacgattactcatgaacttaggatccaggccaaaatattctcctccttgagttg 3847 Query: 865 atagtgtttccgacccagtcgatgaattttca-ttttagcaatcgtatttgaggtta 920 ||||||||| ||| ||||||||||||||| || | |||||| ||||||||||||||| Sbjct: 3848 atagtgttttcgaaccagtcgatgaatttccagtattagcagtcgtatttgaggtta 3904 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7365 Number of Sequences: 1807 Number of extensions: 7365 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)