BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG03RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1796 1663 0.0 >3x_Contig1796 Length = 24558 Score = 1663 bits (839), Expect = 0.0 Identities = 881/893 (98%), Gaps = 2/893 (0%) Strand = Plus / Plus Query: 46 cttgagttgtattggtggatcctaaaatcgattggaaatctcagggtgtgtggacacttt 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21632 cttgagttgtattggtggatcctaaaatcgattggaaatctcagggtgtgtggacacttt 21691 Query: 106 agaataaattagaaaggaatgtggtttgtacgatatgtatttttaaaaaatttagttgaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21692 agaataaattagaaaggaatgtggtttgtacgatatgtatttttaaaaaatttagttgaa 21751 Query: 166 atagtggactatcgatttttgttttaagaatcgtatttaaacatttcaaaagaacctcca 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21752 atagtggactatcgatttttgttttaagaatcgtatttaaacatttcaaaagaacctcca 21811 Query: 226 tttggagacacatcaaacgaagagaccaaaggaaaaattggattttagtattggatacta 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21812 tttggagacacatcaaacgaagagaccaaaggaaaaattggattttagtattggatacta 21871 Query: 286 ctgcggatgataacagtagaatatcctatggatatgaactaactaaaaaagttgcgctat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21872 ctgcggatgataacagtagaatatcctatggatatgaactaactaaaaaagttgcgctat 21931 Query: 346 tgaaaattaatgacagcctatatacggacaacgcacagatggttcctccgatacaaaaga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21932 tgaaaattaatgacagcctatatacggacaacgcacagatggttcctccgatacaaaaga 21991 Query: 406 atccgcatgtaggaagcattgcagtattgcaaacaaaaccaggaaaaaacgatgcattaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21992 atccgcatgtaggaagcattgcagtattgcaaacaaaaccaggaaaaaacgatgcattaa 22051 Query: 466 acatattgaaaagggtcgctcataacgtatcgtatctgatgaaagaggaaaggttcaaag 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22052 acatattgaaaagggtcgctcataacgtatcgtatctgatgaaagaggaaaggttcaaag 22111 Query: 526 taagacaattagttgagttttatccacggaatcgatcacttttaggtatgaacgtgaaca 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22112 taagacaattagttgagttttatccacggaatcgatcacttttaggtatgaacgtgaaca 22171 Query: 586 aaggcatgaagatcatgttgcggcttagagacccattagacgaatataaatttctaccga 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22172 aaggcatgaagatcatgttgcggcttagagacccattagacgaatataaatttctaccga 22231 Query: 646 tagaatctattatgggtaccatgcttcatgagcttacccataatttacatggtcctcatg 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22232 tagaatctattatgggtaccatgcttcatgagcttacccataatttacatggtcctcatg 22291 Query: 706 accgaaagttttacgaaaagctggatcaattatcgggaagacaatggaccattgaacana 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22292 accgaaagttttacgaaaagctggatcaattatcgggaagacaatggaccattgaacaaa 22351 Query: 766 tgggactttacgacagctttctcggcaccgggaaaagatttggtagcaaaccgatggggt 825 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22352 tgggactttacgacagctttctcggcaccgggaaaagattgggtagcaaaccgatggggt 22411 Query: 826 cgattattattgggaagacattagaaagaagtaaaggaagaagactagngtggtacgaca 885 ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 22412 cgattattattggaaagacattagaaagaggtaaaggaagaagactag-gtggtacgaca 22470 Query: 886 cctgtaacaggaccaagaatgtatgcttgagnaatggcagcaatcgccgcaga 938 |||| |||| ||||||||| | ||||| ||| ||||||||||||||| ||||| Sbjct: 22471 cctggaaca-gaccaagaaggaatgctagagaaatggcagcaatcgcggcaga 22522 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6695 Number of Sequences: 1807 Number of extensions: 6695 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)