BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZG03RM1.SCF screened BAC_end
         (949 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1796                                                        1663   0.0  

>3x_Contig1796 
          Length = 24558

 Score = 1663 bits (839), Expect = 0.0
 Identities = 881/893 (98%), Gaps = 2/893 (0%)
 Strand = Plus / Plus

                                                                         
Query: 46    cttgagttgtattggtggatcctaaaatcgattggaaatctcagggtgtgtggacacttt 105
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21632 cttgagttgtattggtggatcctaaaatcgattggaaatctcagggtgtgtggacacttt 21691

                                                                         
Query: 106   agaataaattagaaaggaatgtggtttgtacgatatgtatttttaaaaaatttagttgaa 165
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21692 agaataaattagaaaggaatgtggtttgtacgatatgtatttttaaaaaatttagttgaa 21751

                                                                         
Query: 166   atagtggactatcgatttttgttttaagaatcgtatttaaacatttcaaaagaacctcca 225
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21752 atagtggactatcgatttttgttttaagaatcgtatttaaacatttcaaaagaacctcca 21811

                                                                         
Query: 226   tttggagacacatcaaacgaagagaccaaaggaaaaattggattttagtattggatacta 285
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21812 tttggagacacatcaaacgaagagaccaaaggaaaaattggattttagtattggatacta 21871

                                                                         
Query: 286   ctgcggatgataacagtagaatatcctatggatatgaactaactaaaaaagttgcgctat 345
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21872 ctgcggatgataacagtagaatatcctatggatatgaactaactaaaaaagttgcgctat 21931

                                                                         
Query: 346   tgaaaattaatgacagcctatatacggacaacgcacagatggttcctccgatacaaaaga 405
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21932 tgaaaattaatgacagcctatatacggacaacgcacagatggttcctccgatacaaaaga 21991

                                                                         
Query: 406   atccgcatgtaggaagcattgcagtattgcaaacaaaaccaggaaaaaacgatgcattaa 465
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21992 atccgcatgtaggaagcattgcagtattgcaaacaaaaccaggaaaaaacgatgcattaa 22051

                                                                         
Query: 466   acatattgaaaagggtcgctcataacgtatcgtatctgatgaaagaggaaaggttcaaag 525
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22052 acatattgaaaagggtcgctcataacgtatcgtatctgatgaaagaggaaaggttcaaag 22111

                                                                         
Query: 526   taagacaattagttgagttttatccacggaatcgatcacttttaggtatgaacgtgaaca 585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22112 taagacaattagttgagttttatccacggaatcgatcacttttaggtatgaacgtgaaca 22171

                                                                         
Query: 586   aaggcatgaagatcatgttgcggcttagagacccattagacgaatataaatttctaccga 645
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22172 aaggcatgaagatcatgttgcggcttagagacccattagacgaatataaatttctaccga 22231

                                                                         
Query: 646   tagaatctattatgggtaccatgcttcatgagcttacccataatttacatggtcctcatg 705
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22232 tagaatctattatgggtaccatgcttcatgagcttacccataatttacatggtcctcatg 22291

                                                                         
Query: 706   accgaaagttttacgaaaagctggatcaattatcgggaagacaatggaccattgaacana 765
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 22292 accgaaagttttacgaaaagctggatcaattatcgggaagacaatggaccattgaacaaa 22351

                                                                         
Query: 766   tgggactttacgacagctttctcggcaccgggaaaagatttggtagcaaaccgatggggt 825
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 22352 tgggactttacgacagctttctcggcaccgggaaaagattgggtagcaaaccgatggggt 22411

                                                                         
Query: 826   cgattattattgggaagacattagaaagaagtaaaggaagaagactagngtggtacgaca 885
             ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 22412 cgattattattggaaagacattagaaagaggtaaaggaagaagactag-gtggtacgaca 22470

                                                                  
Query: 886   cctgtaacaggaccaagaatgtatgcttgagnaatggcagcaatcgccgcaga 938
             |||| |||| ||||||||| | ||||| ||| ||||||||||||||| |||||
Sbjct: 22471 cctggaaca-gaccaagaaggaatgctagagaaatggcagcaatcgcggcaga 22522


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6695
Number of Sequences: 1807
Number of extensions: 6695
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)