BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG04RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1100 1580 0.0 >3x_Contig1100 Length = 4703 Score = 1580 bits (797), Expect = 0.0 Identities = 854/868 (98%), Gaps = 4/868 (0%) Strand = Plus / Minus Query: 49 gtttttttgtcctgttcgattctgataatttattgaatacgtcctgtgaaaagttataag 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1524 gtttttttgtcctgttcgattctgataatttattgaatacgtcctgtgaaaagttataag 1465 Query: 109 tattgatttcggtgagatttccttgctgtccactacttttaatttggacttctgaatcat 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1464 tattgatttcggtgagatttccttgctgtccactacttttaatttggacttctgaatcat 1405 Query: 169 ttgcttcttcatggaccaaaacagagctcaattccgagagaactcccttcaatccttcta 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1404 ttgcttcttcatggaccaaaacagagctcaattccgagagaactcccttcaatccttcta 1345 Query: 229 gtctccttttactttccatcatgcagtcatcagtgacaaagatagctcacgcacttttcc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1344 gtctccttttactttccatcatgcagtcatcagtgacaaagatagctcacgcacttttcc 1285 Query: 289 acaagtgccaatagagggattgtaatgcgtaataccaaattaaagttatttgcttccgtt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1284 acaagtgccaatagagggattgtaatgcgtaataccaaattaaagttatttgcttccgtt 1225 Query: 349 ttactgactatagggcccattaaactcttcaattaaagttgaagatatcttcatggatct 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1224 ttactgactatagggcccattaaactcttcaattaaagttgaagatatcttcatggatct 1165 Query: 409 ggagttggcgtagttgaaattattgacgctctaaacacattgtcaataatggtcaaccgt 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1164 ggagttggcgtagttgaaattattgacgctctaaacacattgtcaataatggtcaaccgt 1105 Query: 469 acgataaacctggacaccactgtataaataaaagtcctaacatattgaaaatttggccta 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1104 acgataaacctggacaccactgtataaataaaagtcctaacatattgaaaatttggccta 1045 Query: 529 tgagaactcagaaggagtgcatgattaacgcacttgtatgcagaaaccga-caggtgaac 587 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1044 tgagaactcagaaggagtgcatgattaacgcacttgtatgcagaaaccgagcaggtgaac 985 Query: 588 tctggaaactagaagtatttagaggcacaaatcagtattgagatgcccactgaacttatc 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 tctggaaactagaagtatttagaggcacaaatcagtattgagatgcccactgaacttatc 925 Query: 648 acttatgagcagaacttctcttctggtgtagatgctgaaaacgactaccctcctttggat 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 acttatgagcagaacttctcttctggtgtagatgctgaaaacgactaccctcctttggat 865 Query: 708 tccggcatgggcagtttccaagtttctgaacttgaacgtcaaggtgattcacattagcgt 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 864 tccggcatgggcagtttccaagtttctgaacttgaacgtcaaggtgattcacataagcgt 805 Query: 768 tcgaatgatgagatatcgnagcttcgagacgaaactcttaacggcagagagaaaaaacta 827 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 804 tcgaatgatgagatatcggagctccgagacgaaactcttaacggcagagagaaaaaacta 745 Query: 828 cgacattcgggaaagca-ttcgagg-acagtacagggaatgcttcagttgaaagcatccc 885 ||||| || |||||||| ||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 744 cgacaatc-ggaaagcatttcgaggaacagtacagggaatgctcaagttgaagcaatccc 686 Query: 886 acatcatagcatttacgtagatcaaagc 913 ||||||||||||| |||||||||||||| Sbjct: 685 acatcatagcattaacgtagatcaaagc 658 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5854 Number of Sequences: 1807 Number of extensions: 5854 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)