BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG05FM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1520 1409 0.0 >3x_Contig1520 Length = 10750 Score = 1409 bits (711), Expect = 0.0 Identities = 800/825 (96%), Gaps = 4/825 (0%) Strand = Plus / Minus Query: 85 tttagcatgtgtatgggcttcatgaaacaaaatccacgtgacctcaaattactttacgta 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 tttagcatgtgtatgggcttcatgaaacaaaatccacgtgacctcaaattactttacgta 919 Query: 145 tcaattcccttttctgatctctaattgttttgtaaacaaaaaaaaaacataaacatcaag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 tcaattcccttttctgatctctaattgttttgtaaacaaaaaaaaaacataaacatcaag 859 Query: 205 aacaactggaatcaataacaaacactagcggtctcaattgcatgaataaattcaattgaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 aacaactggaatcaataacaaacactagcggtctcaattgcatgaataaattcaattgaa 799 Query: 265 gagcattgatattgacttctggttccaataacgtagcctcattgaccaaattacaggtaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 gagcattgatattgacttctggttccaataacgtagcctcattgaccaaattacaggtaa 739 Query: 325 actcaatttgggtacgaggctgttaggaaaacatgagtcaacagagggaaaaagtatggg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 actcaatttgggtacgaggctgttaggaaaacatgagtcaacagagggaaaaagtatggg 679 Query: 385 tatctgatgaacgagaggtttttgttcaaggtcaattggtagagcggaaagtggttaaga 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 tatctgatgaacgagaggtttttgttcaaggtcaattggtagagcggaaagtggttaaga 619 Query: 445 ataagcaaggccaggaacaagcggttgctgtggttagtgtgaatggtaaggaaacagagt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 ataagcaaggccaggaacaagcggttgctgtggttagtgtgaatggtaaggaaacagagt 559 Query: 505 tttccgaagacgatgtagcctcggtgaatccttctacctttgataaagtggacgacttgt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 tttccgaagacgatgtagcctcggtgaatccttctacctttgataaagtggacgacttgt 499 Query: 565 ctgaattgacgcatcttaatgaagcttctgttcttttcaatttacagaacaggtaccaag 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctgaattgacgcatcttaatgaagcttctgttcttttcaatttacagaacaggtaccaag 439 Query: 625 atgatttgatttacacttattcaggattatttttagtggccattaacccatacagtanta 684 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 438 atgatttgatttacacttattcaggattatttttagtggccattaacccatacagtaata 379 Query: 685 tcaagatatatagtaacagctatatcaaattataccatggatctccgaanggagataata 744 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 378 tcaagatatatagtaacagctatatcaaattataccatggatctccgaaggaggataata 319 Query: 745 aaccgcatatcttcgctgtcgctgaacaggcttaccag-atcttttgcattcaaagca-g 802 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | Sbjct: 318 aaccgcatatcttcgctgtcgctgaacaggcttaccagaatcttttgcatcaaaagcagg 259 Query: 803 atcaatcgatctt-gttacggtggattcaggtgcttgttaaaccgagaatcccaaaaaaa 861 ||||||||||||| ||||| | || ||||||||| || |||| |||||| | ||||||| Sbjct: 258 atcaatcgatcttggttaccggtgagtcaggtgctggtaaaacagagaatacaaaaaaaa 199 Query: 862 tcttac-atatttggcattccttacgaacgatgaatagattttat 905 |||||| ||||||||||| | |||||| ||||| ||||||||| Sbjct: 198 tcttacaatatttggcatccattacgacggatgataagattttat 154 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7828 Number of Sequences: 1807 Number of extensions: 7828 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)