BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZG05RM1.SCF screened BAC_end
         (905 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1792                                                        1534   0.0  

>3x_Contig1792 
          Length = 28468

 Score = 1534 bits (774), Expect = 0.0
 Identities = 840/857 (98%), Gaps = 4/857 (0%)
 Strand = Plus / Plus

                                                                        
Query: 49   cgaaatttactatcgcagtacattgattcaccaattttgagtattagattgccgtcctta 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7302 cgaaatttactatcgcagtacattgattcaccaattttgagtattagattgccgtcctta 7361

                                                                        
Query: 109  gcgttcaattcaagaagaagatttgcatatgttgatttagtttctccagaagtggcaaag 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7362 gcgttcaattcaagaagaagatttgcatatgttgatttagtttctccagaagtggcaaag 7421

                                                                        
Query: 169  aaagctacaaataggctcaatgggatagagatcaacaattataaattagtagcgaaaata 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7422 aaagctacaaataggctcaatgggatagagatcaacaattataaattagtagcgaaaata 7481

                                                                        
Query: 229  tcgaatgtcaacgaacgaactgaaaggactgacaatgccatatcggatggtagagagata 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7482 tcgaatgtcaacgaacgaactgaaaggactgacaatgccatatcggatggtagagagata 7541

                                                                        
Query: 289  atagttaagaaccttccagatgatattaccatcgatgatttgataaagatgttcaatgag 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7542 atagttaagaaccttccagatgatattaccatcgatgatttgataaagatgttcaatgag 7601

                                                                        
Query: 349  tttggtgatacagaaaaagctagaatagtaactggtgatgaaacaaaccctggacgacat 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7602 tttggtgatacagaaaaagctagaatagtaactggtgatgaaacaaaccctggacgacat 7661

                                                                        
Query: 409  tccagatatgcgttcataacattcaaaaacaaagcgagtgcagataatgctttgtcatta 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7662 tccagatatgcgttcataacattcaaaaacaaagcgagtgcagataatgctttgtcatta 7721

                                                                        
Query: 469  aatggagcggtaatgaacggtaagccattacacgtttcaaaagttatgagaaaggcttat 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7722 aatggagcggtaatgaacggtaagccattacacgtttcaaaagttatgagaaaggcttat 7781

                                                                        
Query: 529  ctagaaagacaagaggtgaagcgtctgcttgcttccagaaaagaaaacccaaaagttgtc 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7782 ctagaaagacaagaggtgaagcgtctgcttgcttccagaaaagaaaacccaaaagttgtc 7841

                                                                        
Query: 589  ggaatatacccattgtctgatcagattaccccagatcaaattcttgctttcattacggag 648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7842 ggaatatacccattgtctgatcagattaccccagatcaaattcttgctttcattacggag 7901

                                                                        
Query: 649  aaagctcaaattagacctccggatattacgaaggttttgctggtctctgatcatgaaagt 708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7902 aaagctcaaattagacctccggatattacgaaggttttgctggtctctgatcatgaaggt 7961

                                                                        
Query: 709  gctttaaatatagcggacaaagaaagcattaccgcaaaagtttcacttgcaatcaatgga 768
            |||||||  |||||||||||||||   |||||||||||||||||||||||||||||||||
Sbjct: 7962 gctttaataatagcggacaaagaagcaattaccgcaaaagtttcacttgcaatcaatgga 8021

                                                                        
Query: 769  tacaagttcaagaaccgaatttttgaaatgtgtttctgctcatgaacttt-cctttatta 827
            ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 8022 tacaagttcaagaaccgaa-ttttgaaatgtgtttctgctcatgaactttcccttcatta 8080

                                                                        
Query: 828  ttccaatgaacaccaaacaaccttgtattcaaccaaagcacgctgntgttaaggaaattt 887
            | ||||||||||| ||||||||||| | ||||||||||||||||| ||| ||||||| ||
Sbjct: 8081 tcccaatgaacacaaaacaaccttg-aatcaaccaaagcacgctgttgtaaaggaaa-tt 8138

                             
Query: 888  aattcacagcaagcgtc 904
            || ||||||||||||||
Sbjct: 8139 aaatcacagcaagcgtc 8155


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7461
Number of Sequences: 1807
Number of extensions: 7461
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)