BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG07FM1.SCF screened BAC_end (828 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig917 613 e-175 >3x_Contig917 Length = 3433 Score = 613 bits (309), Expect = e-175 Identities = 309/309 (100%) Strand = Plus / Plus Query: 89 caattaccggccgaatctcatcttttcctagacgtctccgtttctgacccatcatcatcg 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1912 caattaccggccgaatctcatcttttcctagacgtctccgtttctgacccatcatcatcg 1971 Query: 149 ttttgtcagagctttcgactatcttgtttagctacttctacttctctaccttagcttctt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1972 ttttgtcagagctttcgactatcttgtttagctacttctacttctctaccttagcttctt 2031 Query: 209 ttcgttctccaccggtactttcactatatttctttttgcttaataccaattttcaattct 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2032 ttcgttctccaccggtactttcactatatttctttttgcttaataccaattttcaattct 2091 Query: 269 ggctttctgcagactgcgagcgatctcagacattacgcagattccatgtctggaatacag 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2092 ggctttctgcagactgcgagcgatctcagacattacgcagattccatgtctggaatacag 2151 Query: 329 atttcaatttgttatatattcaactatgaatctttttaagttttccgttccttctgcacg 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2152 atttcaatttgttatatattcaactatgaatctttttaagttttccgttccttctgcacg 2211 Query: 389 aagtaaggg 397 ||||||||| Sbjct: 2212 aagtaaggg 2220 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 55,329 Number of Sequences: 1807 Number of extensions: 55329 Number of successful extensions: 3757 Number of sequences better than 1.0e-20: 1 length of query: 828 length of database: 10,358,551 effective HSP length: 16 effective length of query: 812 effective length of database: 10,329,639 effective search space: 8387666868 effective search space used: 8387666868 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)