BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZG07RM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig531                                                         1669   0.0  

>3x_Contig531 
          Length = 2671

 Score = 1669 bits (842), Expect = 0.0
 Identities = 867/873 (99%), Gaps = 2/873 (0%)
 Strand = Plus / Plus

                                                                        
Query: 44   ccagtgccgtcagaaaagcagaactgttacataatcaatgtaaactgactatgaatgatt 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 ccagtgccgtcagaaaagcagaactgttacataatcaatgtaaactgactatgaatgatt 1647

                                                                        
Query: 104  tcaacagcactatgaagtactgcggtgaggatccaacaaattccgaagccaaaaacacgt 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 tcaacagcactatgaagtactgcggtgaggatccaacaaattccgaagccaaaaacacgt 1707

                                                                        
Query: 164  tcttcagaaacttctctgaattcctaacgcttttcaataaaatatcacaagagaacaagg 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1708 tcttcagaaacttctctgaattcctaacgcttttcaataaaatatcacaagagaacaagg 1767

                                                                        
Query: 224  aacgagaagcaatgaatcgcgtacatgaacaaagacaacagttattacagaaggcttcga 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1768 aacgagaagcaatgaatcgcgtacatgaacaaagacaacagttattacagaaggcttcga 1827

                                                                        
Query: 284  cagaaacccaagttgaaaaatctgccgatgacgaagctgcagatacgatagatatactga 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1828 cagaaacccaagttgaaaaatctgccgatgacgaagctgcagatacgatagatatactga 1887

                                                                        
Query: 344  tcaaaaaactgcgtagcgttgaccctcaacagacaatccctggttcatccgttcccggaa 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 tcaaaaaactgcgtagcgttgaccctcaacagacaatccctggttcatccgttcccggaa 1947

                                                                        
Query: 404  catcatctcatccagaaaaacgttctacgccaagaaccaacagagatcaaaatctattat 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1948 catcatctcatccagaaaaacgttctacgccaagaaccaacagagatcaaaatctattat 2007

                                                                        
Query: 464  cacgagccatgacacttaagagcggcattcaaaacctgtgaacaacctctctcctctagc 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 cacgagccatgacacttaagagcggcattcaaaacctgtgaacaacctctctcctctagc 2067

                                                                        
Query: 524  cctcagtcacatacaaacttttcccgatccaggaaacccaagtacaatacatatgaacag 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 cctcagtcacatacaaacttttcccgatccaggaaacccaagtacaatacatatgaacag 2127

                                                                        
Query: 584  tttaaacgtatatatatatatatatatatatagaccaacgccggaacaatattactcgaa 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 tttaaacgtatatatatatatatatatatatagaccaacgccggaacaatattactcgaa 2187

                                                                        
Query: 644  aagtttcacataacttttccccacgaaacggaaaaataaagccctttaacgtcggaagcc 703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 aagtttcacataacttttccccacgaaacggaaaaataaagccctttaacgtcggaagcc 2247

                                                                        
Query: 704  caaaatttcgtgaattgtccaacctttcagcatagccaaactgacagtactccgatattc 763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 caaaatttcgtgaattgtccaacctttcagcatagccaaactgacagtactccgatattc 2307

                                                                        
Query: 764  atgcaaatctcatctacaaaccggtctctgcttctctcttcgtaaccatacacagttcta 823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2308 atgcaaatctcatctacaaaccggtctctgcttctctcttcgtaaccatacacag-tcta 2366

                                                                        
Query: 824  gatctaaaaacctagatcttaaaacctanatatattacatcagcatttgataccctaaac 883
            ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct: 2367 gatctaaaaacctagatctaaaaacctagatatattacatcagcatttgata-cctaaac 2425

                                             
Query: 884  ccacaaaaataacaattctgccgcacctatatc 916
            |||||||||||||||| |||||||| |||||||
Sbjct: 2426 ccacaaaaataacaatcctgccgcaactatatc 2458


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,493
Number of Sequences: 1807
Number of extensions: 13493
Number of successful extensions: 2858
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)