BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZG08FM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1801                                                        1453   0.0  

>3x_Contig1801 
          Length = 57606

 Score = 1453 bits (733), Expect = 0.0
 Identities = 805/821 (98%), Gaps = 6/821 (0%)
 Strand = Plus / Plus

                                                                         
Query: 88    cacaggtgggatcttgggtcttggtgaaactgaagatgatcacattgggttcgttcacac 147
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14056 cacaggtgggatcttgggtcttggtgaaactgaagatgatcacattgggttcgttcacac 14115

                                                                         
Query: 148   tttggcaaatatgagtccacatccagaatctttacctattaatagattagtttccattaa 207
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14116 tttggcaaatatgagtccacatccagaatctttacctattaatagattagtttccattaa 14175

                                                                         
Query: 208   aggtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggaattcgatga 267
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14176 aggtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggaattcgatga 14235

                                                                         
Query: 268   gatcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagattagc 327
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14236 gatcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagattagc 14295

                                                                         
Query: 328   tgcaggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggttgtaa 387
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14296 tgcaggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggttgtaa 14355

                                                                         
Query: 388   tgccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaagacaa 447
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14356 tgccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaagacaa 14415

                                                                         
Query: 448   agcaatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgctaataa 507
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14416 agcaatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgctaataa 14475

                                                                         
Query: 508   ggctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttagaaaca 567
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14476 ggctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttagaaaca 14535

                                                                         
Query: 568   ctttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactgggggaa 627
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14536 ctttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactgggggaa 14595

                                                                         
Query: 628   tcattatttatccatattagtttaccaaatttataagctgcatattaagatgttagttat 687
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14596 tcattatttatccatattagtttaccaaatttataagctgcatattaagatgttagttat 14655

                                                                         
Query: 688   gacnaaagggtaaatc-gtcagtgagagagttagagaaaaagatggattagttattagtt 746
             ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14656 gac-aaagggtaaatcggtcagtgagagagttagagaaaaagatggattagttattagtt 14714

                                                                         
Query: 747   gtagttgtagttggtttgtg-aaaagagcgcctcagactgttcaaaattcaagcagtggc 805
             |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 14715 gtagttgtagtt-gtttgtgaaaaagagcgcctcagacggttcaaaattcaagcagtggc 14773

                                                                         
Query: 806   aggtttctttctcttgttctggggctggggttctggctggttctttaccaccactttg-g 864
             | ||||| ||||||||||||||||||| ||||  ||||||||||| |||||||| ||| |
Sbjct: 14774 a-gtttccttctcttgttctggggctgtggtttcggctggttcttcaccaccacattgag 14832

                                                      
Query: 865   tgagccaataagaaacttaagcgtttggttcgattttttca 905
             ||||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 14833 tgagcaaataagaaacataagcgtttggttcgatattttca 14873


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6113
Number of Sequences: 1807
Number of extensions: 6113
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)