BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG08FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1453 0.0 >3x_Contig1801 Length = 57606 Score = 1453 bits (733), Expect = 0.0 Identities = 805/821 (98%), Gaps = 6/821 (0%) Strand = Plus / Plus Query: 88 cacaggtgggatcttgggtcttggtgaaactgaagatgatcacattgggttcgttcacac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14056 cacaggtgggatcttgggtcttggtgaaactgaagatgatcacattgggttcgttcacac 14115 Query: 148 tttggcaaatatgagtccacatccagaatctttacctattaatagattagtttccattaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14116 tttggcaaatatgagtccacatccagaatctttacctattaatagattagtttccattaa 14175 Query: 208 aggtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggaattcgatga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14176 aggtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggaattcgatga 14235 Query: 268 gatcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagattagc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14236 gatcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagattagc 14295 Query: 328 tgcaggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggttgtaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14296 tgcaggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggttgtaa 14355 Query: 388 tgccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaagacaa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14356 tgccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaagacaa 14415 Query: 448 agcaatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgctaataa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14416 agcaatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgctaataa 14475 Query: 508 ggctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttagaaaca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14476 ggctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttagaaaca 14535 Query: 568 ctttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactgggggaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14536 ctttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactgggggaa 14595 Query: 628 tcattatttatccatattagtttaccaaatttataagctgcatattaagatgttagttat 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14596 tcattatttatccatattagtttaccaaatttataagctgcatattaagatgttagttat 14655 Query: 688 gacnaaagggtaaatc-gtcagtgagagagttagagaaaaagatggattagttattagtt 746 ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14656 gac-aaagggtaaatcggtcagtgagagagttagagaaaaagatggattagttattagtt 14714 Query: 747 gtagttgtagttggtttgtg-aaaagagcgcctcagactgttcaaaattcaagcagtggc 805 |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 14715 gtagttgtagtt-gtttgtgaaaaagagcgcctcagacggttcaaaattcaagcagtggc 14773 Query: 806 aggtttctttctcttgttctggggctggggttctggctggttctttaccaccactttg-g 864 | ||||| ||||||||||||||||||| |||| ||||||||||| |||||||| ||| | Sbjct: 14774 a-gtttccttctcttgttctggggctgtggtttcggctggttcttcaccaccacattgag 14832 Query: 865 tgagccaataagaaacttaagcgtttggttcgattttttca 905 ||||| |||||||||| ||||||||||||||||| |||||| Sbjct: 14833 tgagcaaataagaaacataagcgtttggttcgatattttca 14873 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6113 Number of Sequences: 1807 Number of extensions: 6113 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)