BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZG08RM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1767                                                        1435   0.0  

>3x_Contig1767 
          Length = 23302

 Score = 1435 bits (724), Expect = 0.0
 Identities = 788/803 (98%), Gaps = 5/803 (0%)
 Strand = Plus / Minus

                                                                         
Query: 47    tgactttcgtcaacatttacataatgtctaagaactgaaaatatcgatgagccctcgaaa 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12464 tgactttcgtcaacatttacataatgtctaagaactgaaaatatcgatgagccctcgaaa 12405

                                                                         
Query: 107   agacagacattttgccaagacggatgccgaaagggttctaggaaataaaaagggtgagct 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12404 agacagacattttgccaagacggatgccgaaagggttctaggaaataaaaagggtgagct 12345

                                                                         
Query: 167   taccaaggggtcacacagagccgaactgcattttgaaatgcctgaatacatctggctttc 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12344 taccaaggggtcacacagagccgaactgcattttgaaatgcctgaatacatctggctttc 12285

                                                                         
Query: 227   taatcttaacgggaacatacacattcccgagcgattgttgtctttattgaacgaggaaga 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12284 taatcttaacgggaacatacacattcccgagcgattgttgtctttattgaacgaggaaga 12225

                                                                         
Query: 287   ccaggatattcccgatgaggttaaagagtttacatatgtacagcaacttgacaagaattt 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12224 ccaggatattcccgatgaggttaaagagtttacatatgtacagcaacttgacaagaattt 12165

                                                                         
Query: 347   actttcgcggacttctgttattggtctagggtttgggttgatgagtcccgtacttggtat 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12164 actttcgcggacttctgttattggtctagggtttgggttgatgagtcccgtacttggtat 12105

                                                                         
Query: 407   gagcactactatgagtattggattgctaaatggtggatctccatcgataatatttgggta 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12104 gagcactactatgagtattggattgctaaatggtggatctccatcgataatatttgggta 12045

                                                                         
Query: 467   tctgatatgtgggataatgacgtggattag-ttcactgtcgctcagtgagatagtctcga 525
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12044 tctgatatgtgggataatgacgtggattagtttcactgtcgctcagtgagatagtctcga 11985

                                                                         
Query: 526   agtaccccatagaacttcacggtgcagcggccatgcttgcgcctggcagacttcggttgc 585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11984 agtaccccatagaacttcacggtgcagcggccatgcttgcgcctggcagacttcggttgc 11925

                                                                         
Query: 586   gtatgtcttggtactgtggttggctaatgttgtttggaagttggacgatgagcactagta 645
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11924 gtatgtcttggtactgtggttggctaatgttgtttggaagttggacgatgagcactagta 11865

                                                                         
Query: 646   ttacgntttgcgggtgcacaattgattatttctttgctgacaatgactaatgaatctctg 705
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11864 ttacg-tttgcgggtgcacaattgattatttctttgctgacaatgactaatgaatctctg 11806

                                                                         
Query: 706   atagactcccggtggttgacgttatggactgtgctaaatgtttatctcattgngactgtg 765
             |||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||
Sbjct: 11805 atagactcccggtggttgacgttatggactgtgctaatgttttatctcattgtgactgtg 11746

                                                                         
Query: 766   gttggagtcattaatctaaaaattttcagtttcatttgaaactattaataaaggtctgtg 825
             ||||||||||||||||||||| |||  ||||||| |||||||||| ||| ||||||||||
Sbjct: 11745 gttggagtcattaatctaaaattttcaagtttca-ttgaaactatcaat-aaggtctgtg 11688

                                    
Query: 826   gttacttggaacttatatgcgat 848
              |||| |||| ||||||||||||
Sbjct: 11687 tttac-tggatcttatatgcgat 11666


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5080
Number of Sequences: 1807
Number of extensions: 5080
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)