BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG08RM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1767 1435 0.0 >3x_Contig1767 Length = 23302 Score = 1435 bits (724), Expect = 0.0 Identities = 788/803 (98%), Gaps = 5/803 (0%) Strand = Plus / Minus Query: 47 tgactttcgtcaacatttacataatgtctaagaactgaaaatatcgatgagccctcgaaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12464 tgactttcgtcaacatttacataatgtctaagaactgaaaatatcgatgagccctcgaaa 12405 Query: 107 agacagacattttgccaagacggatgccgaaagggttctaggaaataaaaagggtgagct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12404 agacagacattttgccaagacggatgccgaaagggttctaggaaataaaaagggtgagct 12345 Query: 167 taccaaggggtcacacagagccgaactgcattttgaaatgcctgaatacatctggctttc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12344 taccaaggggtcacacagagccgaactgcattttgaaatgcctgaatacatctggctttc 12285 Query: 227 taatcttaacgggaacatacacattcccgagcgattgttgtctttattgaacgaggaaga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12284 taatcttaacgggaacatacacattcccgagcgattgttgtctttattgaacgaggaaga 12225 Query: 287 ccaggatattcccgatgaggttaaagagtttacatatgtacagcaacttgacaagaattt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12224 ccaggatattcccgatgaggttaaagagtttacatatgtacagcaacttgacaagaattt 12165 Query: 347 actttcgcggacttctgttattggtctagggtttgggttgatgagtcccgtacttggtat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12164 actttcgcggacttctgttattggtctagggtttgggttgatgagtcccgtacttggtat 12105 Query: 407 gagcactactatgagtattggattgctaaatggtggatctccatcgataatatttgggta 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12104 gagcactactatgagtattggattgctaaatggtggatctccatcgataatatttgggta 12045 Query: 467 tctgatatgtgggataatgacgtggattag-ttcactgtcgctcagtgagatagtctcga 525 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12044 tctgatatgtgggataatgacgtggattagtttcactgtcgctcagtgagatagtctcga 11985 Query: 526 agtaccccatagaacttcacggtgcagcggccatgcttgcgcctggcagacttcggttgc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11984 agtaccccatagaacttcacggtgcagcggccatgcttgcgcctggcagacttcggttgc 11925 Query: 586 gtatgtcttggtactgtggttggctaatgttgtttggaagttggacgatgagcactagta 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11924 gtatgtcttggtactgtggttggctaatgttgtttggaagttggacgatgagcactagta 11865 Query: 646 ttacgntttgcgggtgcacaattgattatttctttgctgacaatgactaatgaatctctg 705 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11864 ttacg-tttgcgggtgcacaattgattatttctttgctgacaatgactaatgaatctctg 11806 Query: 706 atagactcccggtggttgacgttatggactgtgctaaatgtttatctcattgngactgtg 765 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 11805 atagactcccggtggttgacgttatggactgtgctaatgttttatctcattgtgactgtg 11746 Query: 766 gttggagtcattaatctaaaaattttcagtttcatttgaaactattaataaaggtctgtg 825 ||||||||||||||||||||| ||| ||||||| |||||||||| ||| |||||||||| Sbjct: 11745 gttggagtcattaatctaaaattttcaagtttca-ttgaaactatcaat-aaggtctgtg 11688 Query: 826 gttacttggaacttatatgcgat 848 |||| |||| |||||||||||| Sbjct: 11687 tttac-tggatcttatatgcgat 11666 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5080 Number of Sequences: 1807 Number of extensions: 5080 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)