BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG10RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1604 0.0 >3x_Contig1610 Length = 13981 Score = 1604 bits (809), Expect = 0.0 Identities = 861/872 (98%), Gaps = 5/872 (0%) Strand = Plus / Plus Query: 47 tacacatggtactaaacgaaggatttgtgaaagacaagtgttagttcaatacgtcagata 106 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2456 tacacatggtactaaacga-ggatttgtgaaagacaagtgttagttcaatacgtcagata 2514 Query: 107 tcgacactcactcaaaacacaatggtttctcaattattcgaagaaaaggtatgtggaatc 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2515 tcgacactcactcaaaacacaatggtttctcaattattcgaagaaaaggtatgtggaatc 2574 Query: 167 gttgttgcaatggcttttgatttcccttaataatcatactaaccgcatcttacatttatc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2575 gttgttgcaatggcttttgatttcccttaataatcatactaaccgcatcttacatttatc 2634 Query: 227 tgcaggctaaagctgtcaatgaattgccatcaactccaaataacgatgaattgttgaaat 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2635 tgcaggctaaagctgtcaatgaattgccatcaactccaaataacgatgaattgttgaaat 2694 Query: 287 tgtatgctctatacaagcaagcaaccgtcggtgacaacaccaaggaaaaaccaggcatgt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2695 tgtatgctctatacaagcaagcaaccgtcggtgacaacaccaaggaaaaaccaggcatgt 2754 Query: 347 tcaacttgaaggaccgttacaagtgggacgcctgggaattgttgaagggcacttcccaag 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2755 tcaacttgaaggaccgttacaagtgggacgcctgggaattgttgaagggcacttcccaag 2814 Query: 407 aagatgccgaacaacagtacatcgaattggttgaccaattgatcaagaaatacgccccat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2815 aagatgccgaacaacagtacatcgaattggttgaccaattgatcaagaaatacgccccat 2874 Query: 467 agagctggatggtctcgcaagttattgcatcatctaactaactatctatatctacatata 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2875 agagctggatggtctcgcaagttattgcatcatctaactaactatctatatctacatata 2934 Query: 527 tattatccttgatccatatagctaatgataatacccttattactcggtttgaaacacgaa 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2935 tattatccttgatccatatagctaatgataatacccttattactcggtttgaaacacgaa 2994 Query: 587 ttacaagtcacgtgaacaagctaacgccaactatttacccggctatttgcagttgagtgg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2995 ttacaagtcacgtgaacaagctaacgccaactatttacccggctatttgcagttgagtgg 3054 Query: 647 caaaaaattctttcttccctagcagtatataagttaccctccgttaaacaggagcacgat 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3055 caaaaaattctttcttccctagcagtatataagttaccctccgttaaacaggagcacgat 3114 Query: 707 ccctatttttctcttcatttatggggttcatacattgttttctaggcaatatatccgggg 766 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3115 ccctatttttctcttcatttatggggttcatacattgttttctaggcaatatatccgggt 3174 Query: 767 tacagactcttttactttccatctgattccactccaaatcgtagcacaaacgcgctttac 826 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3175 aacagactcttttactttccatctgattccactccaaatcgtagcacaaacgcgctttac 3234 Query: 827 aagatgctacacagctttntcttatttttttgcttatttccaagctttcaagaatttcct 886 |||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||| || Sbjct: 3235 aagatgctacacagctttttctta-ttttttgcttattcccaagcttcaaagaattt-ct 3292 Query: 887 ttcctt-acattctatttatcaaacaaaaaca 917 |||||| ||| ||||||||||||||||||||| Sbjct: 3293 ttccttcaca-tctatttatcaaacaaaaaca 3323 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7298 Number of Sequences: 1807 Number of extensions: 7298 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)