BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZG11FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1278 1364 0.0 >3x_Contig1278 Length = 6932 Score = 1364 bits (688), Expect = 0.0 Identities = 758/776 (97%), Gaps = 4/776 (0%) Strand = Plus / Plus Query: 88 cgaagaaccaagattggatttctgtaaatgggaaaaccatgtcacgaagtcgtgagatac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1651 cgaagaaccaagattggatttctgtaaatgggaaaaccatgtcacgaagtcgtgagatac 1710 Query: 148 gagcctcccattacctattcaaaatcagaggttattcatggaagtcagccctccgagata 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1711 gagcctcccattacctattcaaaatcagaggttattcatggaagtcagccctccgagata 1770 Query: 208 tcacacatgttctagttcgtcaccagactggaaaagtctgttgccggcactgcctgggaa 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1771 tcacacatgttctagttcgtcaccagactggaaaagtctgttgccggcactgcctgggaa 1830 Query: 268 cgggaaatatagagagcaaagagatttgaaggaagggttttgctatccctaggatgattc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1831 cgggaaatatagagagcaaagagatttgaaggaagggttttgctatccctaggatgattc 1890 Query: 328 gcaagaacggatcacgctatgtttgggcaaggtgacacaaaaaaaagccataggg-atag 386 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1891 gcaagaacggatcacgctatgtttgggcaaggtgacacaaaaaaaagccataggggatag 1950 Query: 387 tttgcagggtgcacgggagttccgtttccatggattatgtaagtgcttcggtgcgtggac 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951 tttgcagggtgcacgggagttccgtttccatggattatgtaagtgcttcggtgcgtggac 2010 Query: 447 ctcgaagtcttatgcggatgcaggacgttactttagtacaggaatattcgtgttccgtga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2011 ctcgaagtcttatgcggatgcaggacgttactttagtacaggaatattcgtgttccgtga 2070 Query: 507 tttagttttttttttttttctctagaacaattggtttcctgtacgagccgggctttctgc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 tttagttttttttttttttctctagaacaattggtttcctgtacgagccgggctttctgc 2130 Query: 567 atgtcgttttccatccttgatctctccactttggtttttgtggagaattagtggagagac 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2131 atgtcgttttccatccttgatctctccactttggtttttgtggagaattagtggagagac 2190 Query: 627 attcaagagaaaaaggacgtgtgacatttcgaggggaaaatgaaaaagtatcccaactga 686 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2191 attcaagagaaaaaggacgtgtgacattcggaggggaaaatgaaaaagtatcccaactga 2250 Query: 687 caatctatatacaatggatccgtgtttgtgccctgccagactttactgttagcctaggtg 746 |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2251 caatctatatacaatggatccgtg-ttgtgccctgccagactttactgttagcttaggtg 2309 Query: 747 ctttattcgccatagtggccttagaggtaatgtttcttcggcctttggtgttcaacggcg 806 ||||||||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 2310 ctttattcgtcatagtggccttagaggtaatgtttcttc-gtctttgttgttcaacggcg 2368 Query: 807 tggtacggccatttattaccccccactttttggaaagtaatgcaaaatgttagggc 862 | |||||| ||| ||| ||| ||||||| ||| |||||||||| ||||||||||| Sbjct: 2369 ttgtacgggcatctatagcccgccactttatgg-aagtaatgcagaatgttagggc 2423 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,233 Number of Sequences: 1807 Number of extensions: 13233 Number of successful extensions: 323 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)