BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC48ZG11FM1.SCF screened BAC_end
         (921 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1278                                                        1364   0.0  

>3x_Contig1278 
          Length = 6932

 Score = 1364 bits (688), Expect = 0.0
 Identities = 758/776 (97%), Gaps = 4/776 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   cgaagaaccaagattggatttctgtaaatgggaaaaccatgtcacgaagtcgtgagatac 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1651 cgaagaaccaagattggatttctgtaaatgggaaaaccatgtcacgaagtcgtgagatac 1710

                                                                        
Query: 148  gagcctcccattacctattcaaaatcagaggttattcatggaagtcagccctccgagata 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1711 gagcctcccattacctattcaaaatcagaggttattcatggaagtcagccctccgagata 1770

                                                                        
Query: 208  tcacacatgttctagttcgtcaccagactggaaaagtctgttgccggcactgcctgggaa 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1771 tcacacatgttctagttcgtcaccagactggaaaagtctgttgccggcactgcctgggaa 1830

                                                                        
Query: 268  cgggaaatatagagagcaaagagatttgaaggaagggttttgctatccctaggatgattc 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1831 cgggaaatatagagagcaaagagatttgaaggaagggttttgctatccctaggatgattc 1890

                                                                        
Query: 328  gcaagaacggatcacgctatgtttgggcaaggtgacacaaaaaaaagccataggg-atag 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1891 gcaagaacggatcacgctatgtttgggcaaggtgacacaaaaaaaagccataggggatag 1950

                                                                        
Query: 387  tttgcagggtgcacgggagttccgtttccatggattatgtaagtgcttcggtgcgtggac 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1951 tttgcagggtgcacgggagttccgtttccatggattatgtaagtgcttcggtgcgtggac 2010

                                                                        
Query: 447  ctcgaagtcttatgcggatgcaggacgttactttagtacaggaatattcgtgttccgtga 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 ctcgaagtcttatgcggatgcaggacgttactttagtacaggaatattcgtgttccgtga 2070

                                                                        
Query: 507  tttagttttttttttttttctctagaacaattggtttcctgtacgagccgggctttctgc 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 tttagttttttttttttttctctagaacaattggtttcctgtacgagccgggctttctgc 2130

                                                                        
Query: 567  atgtcgttttccatccttgatctctccactttggtttttgtggagaattagtggagagac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2131 atgtcgttttccatccttgatctctccactttggtttttgtggagaattagtggagagac 2190

                                                                        
Query: 627  attcaagagaaaaaggacgtgtgacatttcgaggggaaaatgaaaaagtatcccaactga 686
            ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 2191 attcaagagaaaaaggacgtgtgacattcggaggggaaaatgaaaaagtatcccaactga 2250

                                                                        
Query: 687  caatctatatacaatggatccgtgtttgtgccctgccagactttactgttagcctaggtg 746
            |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 2251 caatctatatacaatggatccgtg-ttgtgccctgccagactttactgttagcttaggtg 2309

                                                                        
Query: 747  ctttattcgccatagtggccttagaggtaatgtttcttcggcctttggtgttcaacggcg 806
            ||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 2310 ctttattcgtcatagtggccttagaggtaatgtttcttc-gtctttgttgttcaacggcg 2368

                                                                    
Query: 807  tggtacggccatttattaccccccactttttggaaagtaatgcaaaatgttagggc 862
            | |||||| ||| |||  ||| ||||||| ||| |||||||||| |||||||||||
Sbjct: 2369 ttgtacgggcatctatagcccgccactttatgg-aagtaatgcagaatgttagggc 2423


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,233
Number of Sequences: 1807
Number of extensions: 13233
Number of successful extensions: 323
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)