BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZH02RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1803 1626 0.0 >3x_Contig1803 Length = 52241 Score = 1626 bits (820), Expect = 0.0 Identities = 875/888 (98%), Gaps = 4/888 (0%) Strand = Plus / Minus Query: 49 aatgacaaactaaccttgttaaagaccgatcatccaaaattcagcactgtcatattgcag 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16850 aatgacaaactaaccttgttaaagaccgatcatccaaaattcagcactgtcatattgcag 16791 Query: 109 gggctctgttcgtcgaatgtgcatcatgtgctctgccatgatgtttcttttttttcatta 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16790 gggctctgttcgtcgaatgtgcatcatgtgctctgccatgatgtttcttttttttcatta 16731 Query: 169 tatcgaggcgtgttttggtgtttaaactggaaattagggtaaaaatatgtttaagctatt 228 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 16730 tatcgaggcgtgttttggtgtttaaactggaaattagggtaaaaatatgtaaaagctatt 16671 Query: 229 cgaaaagtcacacttttttagcagaagacgataccaccaaaaggaaatgtcgataggttg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16670 cgaaaagtcacacttttttagcagaagacgataccaccaaaaggaaatgtcgataggttg 16611 Query: 289 ttgctttacttaaaactagtttaattagtacatacaccagtttctcgcccaagttctcta 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16610 ttgctttacttaaaactagtttaattagtacatacaccagtttctcgcccaagttctcta 16551 Query: 349 catattgcgaatacaaatcttgtgctgaaagtgcgtatccctaactgctgagccttattt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16550 catattgcgaatacaaatcttgtgctgaaagtgcgtatccctaactgctgagccttattt 16491 Query: 409 ctcatattaaagtcatcggtaactagactgacaaaattaaatctctgagtactttgtcca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16490 ctcatattaaagtcatcggtaactagactgacaaaattaaatctctgagtactttgtcca 16431 Query: 469 tcttcagatagaggtatgcagtccttacctttttctattgcatcattgtttaaaacatta 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16430 tcttcagatagaggtatgcagtccttacctttttctattgcatcattgtttaaaacatta 16371 Query: 529 aacttatcttgtgctttggctatggcatcaatgacaaactcgtcaacatgggatttccac 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16370 aacttatcttgtgctttggctatggcatcaatgacaaactcgtcaacatgggatttccac 16311 Query: 589 gtcatctgctcttcgatctccaagtgctcttcaagatgccctgctacattacccgtaaat 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16310 gtcatctgctcttcgatctccaagtgctcttcaagatgccctgctacattacccgtaaat 16251 Query: 649 cttagggcaagtagtttacgctcgtaatatagctgcctaacagcaatcactgctctagtt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16250 cttagggcaagtagtttacgctcgtaatatagctgcctaacagcaatcactgctctagtt 16191 Query: 709 gcagcttcgagcacactttcatcttttgatttacggagaaatctcaattcttggaaggta 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16190 gcagcttcgagcacactttcatcttttgatttacggagaaatctcaattcttggaaggta 16131 Query: 769 gtcaaacatatggcaaatttcaaaacactacttgtggccagcttgtaaatatgagcaaaa 828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16130 gtcaaacatatggcaaatttcaaaacactacttgtggccagcttgtaaatatgagcaaaa 16071 Query: 829 tgccttcacccaagtggttgcatctagcacaaagattgtcacatttgttgtcaagcttgc 888 |||| ||| |||||||||||||||||||||||||| ||||||| ||| |||| |||||| Sbjct: 16070 tgcc-tcaaccaagtggttgcatctagcacaaagaatgtcaca-ttggtgtc-agcttga 16014 Query: 889 caatccaaattccccaaaaaac-tcttttgagtaattctttctgtcta 935 |||| ||||||||||||||||| ||| |||||||||||| |||||||| Sbjct: 16013 caattcaaattccccaaaaaacttctattgagtaattctctctgtcta 15966 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6701 Number of Sequences: 1807 Number of extensions: 6701 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)