BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZH03FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1264 1439 0.0 >3x_Contig1264 Length = 6524 Score = 1439 bits (726), Expect = 0.0 Identities = 804/819 (98%), Gaps = 10/819 (1%) Strand = Plus / Plus Query: 87 ccggcattctaaatcatcaaaatcaaaatcgtacaataagctgttagtattagtatcgag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 ccggcattctaaatcatcaaaatcaaaatcgtacaataagctgttagtattagtatcgag 1042 Query: 147 aacggagtattcaccagtgaactcatattttgaaatgattttctgattaagatcgtacaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 aacggagtattcaccagtgaactcatattttgaaatgattttctgattaagatcgtacaa 1102 Query: 207 agacatgtgctcaacaattgcctttggtattttcagtacggctctttgaatgttagaaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1103 agacatgtgctcaacaattgcctttggtattttcagtacggctctttgaatgttagaaga 1162 Query: 267 tactgaacaatgaggattcttgggtgcgagagttggattcgatagatacctatttgtggt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 tactgaacaatgaggattcttgggtgcgagagttggattcgatagatacctatttgtggt 1222 Query: 327 gatattacttgcccttgccgtaaatgccattggaatttctaaaggattatttgatacgtt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 gatattacttgcccttgccgtaaatgccattggaatttctaaaggattatttgatacgtt 1282 Query: 387 actcaacaagtttagaacacgtaaagaaaccaatgaagaaagaccggcgatgatcgcgtt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 actcaacaagtttagaacacgtaaagaaaccaatgaagaaagaccggcgatgatcgcgtt 1342 Query: 447 tgtagtggcaatggcaggaataatgttaccagccatttgtttaatatcaaagacagattt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1343 tgtagtggcaatggcaggaataatgttaccagccatttgtttaatatcaaagacagattt 1402 Query: 507 aggtgcaatgtggaagatgtaagatctgatattcgcggcacaagctacaaacaataaggt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1403 aggtgcaatgtggaagatgtaagatctgatattcgcggcacaagctacaaacaataaggt 1462 Query: 567 atcgtcatcatccttatcgaattctatgaatggttcctgccttaatctcaacatcaatgt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1463 atcgtcatcatccttatcgaattctatgaatggttcctgccttaatctcaacatcaatgt 1522 Query: 627 cttcgtaacttcgataaacttatctacattttcttgcaatgtccatacctgagctagatc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1523 cttcgtaacttcgataaacttatctacattttcttgcaatgtccatacctgagctagatc 1582 Query: 687 tgttgggatattatcagatggtagtaaagcacctaaaggtgtttggtttcactctcgttt 746 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1583 tgttgggatattatcagatggtagtaaagcacctaaaggtg-ttggtttcactctcgttt 1641 Query: 747 tccaaagatttttaattcttttagaagtttattgatattcatcgacgaacaatttcttta 806 |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 1642 tccaaagattttcaat--ctttagaagtttattgata-tcatcgacgaacaatttcttta 1698 Query: 807 aaataatctgtgattntccgtctcatcgccgggacttgactaactgctggagagcatggt 866 |||| |||||||||| | |||||||||||| |||||||||||||||||||||||||| || Sbjct: 1699 aaat-atctgtgatttt-cgtctcatcgcc-ggacttgactaactgctggagagcat-gt 1754 Query: 867 aattcgntagtcttcctttttgatgcgggccgatttctt 905 |||||| ||||| |||| ||||||||||| ||||||||| Sbjct: 1755 aattcgttagtc-tcctctttgatgcggg-cgatttctt 1791 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7668 Number of Sequences: 1807 Number of extensions: 7668 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)