BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC48ZH04RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1795 1497 0.0 >3x_Contig1795 Length = 38452 Score = 1497 bits (755), Expect = 0.0 Identities = 849/870 (97%), Gaps = 8/870 (0%) Strand = Plus / Plus Query: 48 tgactgtttgcacccatgcacccatgaatattttataatcactctactatcctttttaat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5891 tgactgtttgcacccatgcacccatgaatattttataatcactctactatcctttttaat 5950 Query: 108 tttcttcattcccaaaacaggaattttactctcaagtttcctgtgaaaatgatggccata 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5951 tttcttcattcccaaaacaggaattttactctcaagtttcctgtgaaaatgatggccata 6010 Query: 168 ctactggcagccattttcccgtttgcagctggggagtttcctgcctggccgcaaccacac 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6011 ctactggcagccattttcccgtttgcagctggggagtttcctgcctggccgcaaccacac 6070 Query: 228 cagacaggacgctccccgtttggtccaacacttcgagcgtagagacccgctcggttttgg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6071 cagacaggacgctccccgtttggtccaacacttcgagcgtagagacccgctcggttttgg 6130 Query: 288 tcttactcattgtccagctgaaccttcctctcccctcggtgtctctgtttccctttgacg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6131 tcttactcattgtccagctgaaccttcctctcccctcggtgtctctgtttccctttgacg 6190 Query: 348 gcaaggaggtgtgtctgtgtttcatcctgagcgtatctccctctcccgtatgctaggcta 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6191 gcaaggaggtgtgtctgtgtttcatcctgagcgtatctccctctcccgtatgctaggcta 6250 Query: 408 ggctaggctaggtccactctgcaaccactcagggctggcctgccggaatctccttcactg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6251 ggctaggctaggtccactctgcaaccactcagggctggcctgccggaatctccttcactg 6310 Query: 468 ggaaattctgaccggtccctcgatcgctccttctctcactagtagtttgtgttggaatcg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6311 ggaaattctgaccggtccctcgatcgctccttctctcactagtagtttgtgttggaatcg 6370 Query: 528 aagtttcgattcatttcactaaacaaaaaagtattgaaattcggtatatgaatgtaaagt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6371 aagtttcgattcatttcactaaacaaaaaagtattgaaattcggtatatgaatgtaaagt 6430 Query: 588 aacatttgtattctatataatcatatagcaagaacatcaagcacacagatatatcaacaa 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6431 aacatttgtattctatataatcatatagcaagaacatcaagcacacagatatatcaacaa 6490 Query: 648 gatggctcaagtatgtgggaaacaagtgctatatccataccctggagaaattacgaaaga 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6491 gatggctcaagtatgtgggaaacaagtgctatatccataccctggagaaattacgaaaga 6550 Query: 708 anaggattgactcagcgatcatgaccacgaaatatagtaattggcgacatctatttggca 767 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | Sbjct: 6551 aaaggattgactcagcgatcatgacgacgaaatatagtaattggcgacatctattggcaa 6610 Query: 768 tat-aaatgtaatgaattgaatt-acaccatagcataaatgagaacagtctggaccagat 825 ||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6611 tataaaatgtaatgaa-tgaattaacaccatagcataaatgagaacagtctggaccagat 6669 Query: 826 gctgttcgatttccagt-atgtacaaagtggatttcttaatttcgaa-ttttaaccattt 883 ||||||||| ||||||| |||||||| |||| |||||| |||||| ||||||| | || Sbjct: 6670 gctgttcga-ttccagtaatgtacaagtgggatatcttaa-ttcgaagttttaacga-tt 6726 Query: 884 gcaggaagagactccttatgatacctggat 913 ||||||||||||| | ||||||| |||||| Sbjct: 6727 gcaggaagagacttcatatgataactggat 6756 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5351 Number of Sequences: 1807 Number of extensions: 5351 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)