BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZA01FM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1516 1447 0.0 >3x_Contig1516 Length = 8750 Score = 1447 bits (730), Expect = 0.0 Identities = 784/797 (98%), Gaps = 4/797 (0%) Strand = Plus / Plus Query: 87 agatccgaacaaacgcaaggaattgggggagatagacattgaatggtgttccgtttagtt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1434 agatccgaacaaacgcaaggaattgggggagatagacattgaatggtgttccgtttagtt 1493 Query: 147 tcataatgtataccataggatgtaagtgagaacggcggttgattcggtcacgcaaacgcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1494 tcataatgtataccataggatgtaagtgagaacggcggttgattcggtcacgcaaacgcc 1553 Query: 207 aataagactgttaaacatacgcaggattttgtcagcaagattcttttctgccgtttcttt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1554 aataagactgttaaacatacgcaggattttgtcagcaagattcttttctgccgtttcttt 1613 Query: 267 ttaccgaaaatattcttgtgtcaggtcattcaaagatgacagaaaaacgtgatcaatgaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614 ttaccgaaaatattcttgtgtcaggtcattcaaagatgacagaaaaacgtgatcaatgaa 1673 Query: 327 gagtgggcagaaaggtgggttgactgcagcgaccagattaggcaacagaaccgctgatca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1674 gagtgggcagaaaggtgggttgactgcagcgaccagattaggcaacagaaccgctgatca 1733 Query: 387 tgagcatgtgaccttaaaatatcatggcttacgaactccaccaaaccacttggctcttcg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1734 tgagcatgtgaccttaaaatatcatggcttacgaactccaccaaaccacttggctcttcg 1793 Query: 447 attgttagttttattttatttttttttttttttacaacaagagatttgtgaaatcatcat 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1794 attgttagttttattttatttttttttttttttacaacaagagatttgtgaaatcatcat 1853 Query: 507 ctcgagatgagatacgagatgaggtgaaatcaaatggtttgtgattgtaatcatggcgtc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1854 ctcgagatgagatacgagatgaggtgaaatcaaatggtttgtgattgtaatcatggcgtc 1913 Query: 567 ttttctataagccataattgaaacataatgatggctgttacagtatcaggaaataccgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1914 ttttctataagccataattgaaacataatgatggctgttacagtatcaggaaataccgga 1973 Query: 627 cagtcaaccgctgaaagactgcaatgtgangtttttctcgtgaaaaagaagcgacagtgc 686 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1974 cagtcaaccgctgaaagactgcaatgtgagttttttctcgtgaaaaagaagcgacagtgc 2033 Query: 687 ggaatgacaagacgagctggttcccagttctgttcagaacactctactgatagcgacaga 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2034 ggaatgacaagacgagctggttcccagttctgttcagaacactctactgatagcgacaga 2093 Query: 747 gttccttgtccattggacccttctcatactgtgtgcttgagtaagatgcgtgtgcatatg 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2094 gttccttgtccattggacccttctcatactgtgtgcttgagtaagatgcgtgtgcatatg 2153 Query: 807 aggaaatgc-attaatttagacctgatgtttcttat-tagc-aaacagcgcg-aatttct 862 ||||||||| || ||||||||| ||||||||| ||| ||| |||||||||| |||| | Sbjct: 2154 aggaaatgcaataaatttagacatgatgtttcatatcaagcaaaacagcgcgaaattcca 2213 Query: 863 tggtttaaaaaaggact 879 ||||||||| ||||||| Sbjct: 2214 tggtttaaagaaggact 2230 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,003 Number of Sequences: 1807 Number of extensions: 15003 Number of successful extensions: 2529 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)