BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZA04FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1665 1534 0.0 >3x_Contig1665 Length = 15710 Score = 1534 bits (774), Expect = 0.0 Identities = 820/829 (98%), Gaps = 5/829 (0%) Strand = Plus / Minus Query: 87 ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8688 ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 8629 Query: 147 atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8628 atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 8569 Query: 207 ccttctggacgttttaaaggttgatgatttggatcaagatatggaacttgccatggatat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8568 ccttctggacgttttaaaggttgatgatttggatcaagatatggaacttgccatggatat 8509 Query: 267 tagtaatgaggatgcgttgagcgtagatgaggaaggg-gatattatgggagaagaggagg 325 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 8508 tagtaatgaggatgcgttgagcgtagatgaggaagggagatattatgggagaagaggagg 8449 Query: 326 aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8448 aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 8389 Query: 386 ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8388 ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 8329 Query: 446 cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtatggatgaaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8328 cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtatggatgaaa 8269 Query: 506 acctagcctcgttgaacgagtttcatatttacaatggtttcgattctactccatcattcc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8268 acctagcctcgttgaacgagtttcatatttacaatggtttcgattctactccatcattcc 8209 Query: 566 ctcgtgaatatagtacgccgaacgaatcatctgcatcattgactcaagatcaagatggct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8208 ctcgtgaatatagtacgccgaacgaatcatctgcatcattgactcaagatcaagatggct 8149 Query: 626 tcagggatgaagatgataaaaagttactaagtagaagaaggaaacgaataccaaaaagaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8148 tcagggatgaagatgataaaaagttactaagtagaagaaggaaacgaataccaaaaagaa 8089 Query: 686 aaagatctatccatagttttgaagtatcaaagagagaacattcattgngtgtagtagtta 745 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 8088 aaagatctatccatagttttgaagtatcaaagagagaacattcattgggtgtagtagtta 8029 Query: 746 tgaccttgaagagtattacaaaccttccattggttaagaagaaaatgtcaaaaacaggct 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8028 tgaccttgaagagtattacaaaccttccattggttaagaagaaaatgtcaaaaacaggct 7969 Query: 806 atgatatggatccgttcgttat-attacatttggtaggagagtgttt-aaagctcttac- 862 |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 7968 atgatatggatccgttcgttataattacatttggtaggagagtgtttaaaagctcttaca 7909 Query: 863 agagacatactttgaaccccgagt-ccacgaagtttgtgcctttgaagt 910 ||||||||||||||||||| |||| | ||||||||||||| |||||||| Sbjct: 7908 agagacatactttgaacccggagtacaacgaagtttgtgcatttgaagt 7860 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7790 Number of Sequences: 1807 Number of extensions: 7790 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)