BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZA09RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1539 1328 0.0 >3x_Contig1539 Length = 11016 Score = 1328 bits (670), Expect = 0.0 Identities = 818/854 (95%), Gaps = 10/854 (1%) Strand = Plus / Plus Query: 48 cttcttcttacaataagtcttcccattattcttattaccagattgaagacttttctttgc 107 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 8585 cttcttcttcaaataagtcttcgcattattcttattaccagattgaagacttttctttgc 8644 Query: 108 aagttgttgctgctgatctatctgtgtttgcaaatgcgcctgtttcttattcaatagttg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8645 aagttgttgctgctgatctatctgtgtttgcaaatgcgcctgtttcttattcaatagttg 8704 Query: 168 gatatgttctctaaggtcgacaatcgccttcttaggcagttctttctgttgtttggaagt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8705 gatatgttctctaaggtcgacaatcgccttcttaggcagttctttctgttgtttggaagt 8764 Query: 228 tccgaagaaatagccccacatgatgtgtctaatgtattcccgtcaaatctgagcctaatg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8765 tccgaagaaatagccccacatgatgtgtctaatgtattcccgtcaaatctgagcctaatg 8824 Query: 288 ccacagggtttaaaaaaatagaagatgttaaaattatacctgagattgccaggtgagtct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8825 ccacagggtttaaaaaaatagaagatgttaaaattatacctgagattgccaggtgagtct 8884 Query: 348 atgaatatgagcccagcgcctcagtctatctttgatagtagctgttcttctttcttactt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8885 atgaatatgagcccagcgcctcagtctatctttgatagtagctgttcttctttcttactt 8944 Query: 408 attgttaatccaatattgttcagttttttatccgttttaatttcacaatttcagatagga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8945 attgttaatccaatattgttcagttttttatccgttttaatttcacaatttcagatagga 9004 Query: 468 taatcttttttggggggggggngggagactacggcggcgaacgggggagatgtgaaactt 527 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9005 taatcttttttgggggggggg-gggagactacggcggcgaacgggggagatgtgaaactt 9063 Query: 528 cattacccgaatttgaacattccagttccatatcacgtgatttatattgatcacgtgata 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9064 cattacccgaatttgaacattccagttccatatcacgtgatttatattgatcacgtgata 9123 Query: 588 gatcttttttcacattgtagtttctttttctcgccaaaccagagaaactcactatgcccc 647 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9124 gatcttttttcacattgtagtttcttcttctcgccaaaccagagaaactcactatgcccc 9183 Query: 648 acctagtcaaaaaggatgagttcattttactccgaacggaccttttcacgatccaagcag 707 |||||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 9184 acctagtcaaaagggatgagttcatatcactccgaacggacctttccacgatccaagcag 9243 Query: 708 agcagttaccggcggggtagcacccggactaaagcagcaaggaatgccttccttaccgtg 767 |||||||||| ||||||||||| ||||||||||||||| ||||||| | ||| ||||||| Sbjct: 9244 agcagttacc-gcggggtagca-ccggactaaagcagc-aggaatggc-tccataccgtg 9299 Query: 768 agcaatgtttatactacctatcctttggggccattatttaactgctaactgcatttgggc 827 |||||||| |||||||| || | ||||||||||||| |||||||||||||||| | || Sbjct: 9300 agcaatgtatatactacata-gcattggggccattatctaactgctaactgcatct-ggt 9357 Query: 828 cctggatgaggtatcagtccccgattccaaagattcc-ctttggcttttcgctt-aatgc 885 |||||||||| ||||||| | ||| | ||||||||| || |||| | |||||| ||||| Sbjct: 9358 cctggatgagtaatcagtcacagatccaaaagattccactatggc-tctcgcttcaatgc 9416 Query: 886 taaaacatgctctt 899 |||| ||||||||| Sbjct: 9417 taaatcatgctctt 9430 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8464 Number of Sequences: 1807 Number of extensions: 8464 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)