BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZA11FM1.SCF screened BAC_end
         (910 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1761                                                        1392   0.0  

>3x_Contig1761 
          Length = 23186

 Score = 1392 bits (702), Expect = 0.0
 Identities = 800/825 (96%), Gaps = 7/825 (0%)
 Strand = Plus / Plus

                                                                         
Query: 88    ctttagaggaagctagagctaagagaactcaccgtgttattaaccatccatactatggta 147
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14603 ctttagaggaagctagagctaagagaactcaccgtgttattaaccatccatactatggta 14662

                                                                         
Query: 148   atttcaccggtcctcaagcagaagattatctcagaagtagagaacgtggtgatttcgtta 207
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14663 atttcaccggtcctcaagcagaagattatctcagaagtagagaacgtggtgatttcgtta 14722

                                                                         
Query: 208   tcagacaatctttttgtggtgatgatcaccttgccattacatggaagttggacaaagatt 267
             |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14723 tcagacaatcttctcgtggtgatgatcaccttgccattacatggaagttggacaaagatt 14782

                                                                         
Query: 268   tgttccaacacgttgatatcctggaaaaggacaaggaaaatccattggcgttaggtaaga 327
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14783 tgttccaacacgttgatatcctggaaaaggacaaggaaaatccattggcgttaggtaaga 14842

                                                                         
Query: 328   ctctaatagtggaggatcaaaaatatcatgatctagatcaaatcatcgttgaatatttgc 387
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14843 ctctaatagtggaggatcaaaaatatcatgatctagatcaaatcatcgttgaatatttgc 14902

                                                                         
Query: 388   agaataaagtgaggttgctaaacgaaattacttctaacgaaaagttcaaaaagggaacca 447
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14903 agaataaagtgaggttgctaaacgaaattacttctaacgaaaagttcaaaaagggaacca 14962

                                                                         
Query: 448   agaaagaagtcatcaagttcatcgaagactattcgaaggtgaaccccaacagatccgttt 507
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14963 agaaagaagtcatcaagttcatcgaagactattcgaaggtgaaccccaacagatccgttt 15022

                                                                         
Query: 508   attatttcagtttcaattacgaacaccctggatggttctacctaatgtttaaaatcaatg 567
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15023 attatttcagtttcaattacgaacaccctggatggttctacctaatgtttaaaatcaatg 15082

                                                                         
Query: 568   cccagtcccaactatacgtatggaatgttaaacttacacatactgggtttttcttggtta 627
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15083 cccagtcccaactatacgtatggaatgttaaacttacacatactgggtttttcttggtta 15142

                                                                         
Query: 628   attacaactatccaactgtgattcaactctgcaatggtttcaaaactcttctcaaatcca 687
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15143 attacaactatccaactgtgattcaactctgcaatggtttcaaaactcttctcaaatcca 15202

                                                                         
Query: 688   gtagcagaaacaagacccaagacatcaacaacaacaacttcgggaggctactatgggata 747
             |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 15203 gtagcagaaacaagacccaagacaacaacaacaacaac-tcgggaggctactat-ggata 15260

                                                                         
Query: 748   ttgagcagcgggtacaacagttgcatttttttctgttct-cctccatcgaatgtgttatt 806
             |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 15261 ttgagcagcggtaacaacagttgcatttttttctgttctccctccatcgaatgtgttaat 15320

                                                                         
Query: 807   aggaccatttttaaa--tattatgcaagttggatgtgtat-atagtaatcgaaaagatct 863
             | ||| || | ||||   || |||||||||| |||||||| |||||||||||||||||||
Sbjct: 15321 aagacaatatataaaataataatgcaagttgtatgtgtataatagtaatcgaaaagatct 15380

                                                          
Query: 864   cgaatgacctcattgaagttatagctttagtttact-tgcacttt 907
             |||||||| ||||  | ||||||||| ||||||||| ||||||||
Sbjct: 15381 cgaatgacttcatgaaggttatagctatagtttactatgcacttt 15425


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7417
Number of Sequences: 1807
Number of extensions: 7417
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)