BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZA11FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1761 1392 0.0 >3x_Contig1761 Length = 23186 Score = 1392 bits (702), Expect = 0.0 Identities = 800/825 (96%), Gaps = 7/825 (0%) Strand = Plus / Plus Query: 88 ctttagaggaagctagagctaagagaactcaccgtgttattaaccatccatactatggta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14603 ctttagaggaagctagagctaagagaactcaccgtgttattaaccatccatactatggta 14662 Query: 148 atttcaccggtcctcaagcagaagattatctcagaagtagagaacgtggtgatttcgtta 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14663 atttcaccggtcctcaagcagaagattatctcagaagtagagaacgtggtgatttcgtta 14722 Query: 208 tcagacaatctttttgtggtgatgatcaccttgccattacatggaagttggacaaagatt 267 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14723 tcagacaatcttctcgtggtgatgatcaccttgccattacatggaagttggacaaagatt 14782 Query: 268 tgttccaacacgttgatatcctggaaaaggacaaggaaaatccattggcgttaggtaaga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14783 tgttccaacacgttgatatcctggaaaaggacaaggaaaatccattggcgttaggtaaga 14842 Query: 328 ctctaatagtggaggatcaaaaatatcatgatctagatcaaatcatcgttgaatatttgc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14843 ctctaatagtggaggatcaaaaatatcatgatctagatcaaatcatcgttgaatatttgc 14902 Query: 388 agaataaagtgaggttgctaaacgaaattacttctaacgaaaagttcaaaaagggaacca 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14903 agaataaagtgaggttgctaaacgaaattacttctaacgaaaagttcaaaaagggaacca 14962 Query: 448 agaaagaagtcatcaagttcatcgaagactattcgaaggtgaaccccaacagatccgttt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14963 agaaagaagtcatcaagttcatcgaagactattcgaaggtgaaccccaacagatccgttt 15022 Query: 508 attatttcagtttcaattacgaacaccctggatggttctacctaatgtttaaaatcaatg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15023 attatttcagtttcaattacgaacaccctggatggttctacctaatgtttaaaatcaatg 15082 Query: 568 cccagtcccaactatacgtatggaatgttaaacttacacatactgggtttttcttggtta 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15083 cccagtcccaactatacgtatggaatgttaaacttacacatactgggtttttcttggtta 15142 Query: 628 attacaactatccaactgtgattcaactctgcaatggtttcaaaactcttctcaaatcca 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15143 attacaactatccaactgtgattcaactctgcaatggtttcaaaactcttctcaaatcca 15202 Query: 688 gtagcagaaacaagacccaagacatcaacaacaacaacttcgggaggctactatgggata 747 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 15203 gtagcagaaacaagacccaagacaacaacaacaacaac-tcgggaggctactat-ggata 15260 Query: 748 ttgagcagcgggtacaacagttgcatttttttctgttct-cctccatcgaatgtgttatt 806 ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 15261 ttgagcagcggtaacaacagttgcatttttttctgttctccctccatcgaatgtgttaat 15320 Query: 807 aggaccatttttaaa--tattatgcaagttggatgtgtat-atagtaatcgaaaagatct 863 | ||| || | |||| || |||||||||| |||||||| ||||||||||||||||||| Sbjct: 15321 aagacaatatataaaataataatgcaagttgtatgtgtataatagtaatcgaaaagatct 15380 Query: 864 cgaatgacctcattgaagttatagctttagtttact-tgcacttt 907 |||||||| |||| | ||||||||| ||||||||| |||||||| Sbjct: 15381 cgaatgacttcatgaaggttatagctatagtttactatgcacttt 15425 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7417 Number of Sequences: 1807 Number of extensions: 7417 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)