BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZA12RM1.SCF screened BAC_end (975 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1751 1211 0.0 >3x_Contig1751 Length = 24682 Score = 1211 bits (611), Expect = 0.0 Identities = 643/650 (98%), Gaps = 3/650 (0%) Strand = Plus / Minus Query: 79 gttaacacgtctgctaacatgcagcattgtacaaacgaaggtattactagaagtcacatc 138 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20811 gttaacacgtctgcaaacatgcagcattgtacaaacgaaggtattactagaagtcacatc 20752 Query: 139 ctaccaactatatagaatcatacttagacttgcaacgattatgttaagcaactattatgt 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20751 ctaccaactatatagaatcatacttagacttgcaacgattatgttaagcaactattatgt 20692 Query: 199 gtgtcttgctactaatttcccaagtggaatcattaaaacaaataaatatattattaacgg 258 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20691 gtttcttgctactaatttcccaagtggaatcattaaaacaaataaatatattattaacgg 20632 Query: 259 actttcaaaagagtaaagatataggactcgttaataacaatacgatataagattaaacgt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20631 actttcaaaagagtaaagatataggactcgttaataacaatacgatataagattaaacgt 20572 Query: 319 ttctatcatttatatgtctaccctattcttgctcttcttcttcgtcactttctagagcag 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20571 ttctatcatttatatgtctaccctattcttgctcttcttcttcgtcactttctagagcag 20512 Query: 379 caaatgcattgaaagcctttgaaggcttgtctgcgacgatatccctcgcatcagctggtc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20511 caaatgcattgaaagcctttgaaggcttgtctgcgacgatatccctcgcatcagctggtc 20452 Query: 439 ttgaggatgaaatgtgtttgtttggcttcaccttcaatgtttcttgagcgatgacaatgg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20451 ttgaggatgaaatgtgtttgtttggcttcaccttcaatgtttcttgagcgatgacaatgg 20392 Query: 499 ttggttcttcttcttcagccacagactttcttctgaccgctggagcagtttctagtgtag 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20391 ttggttcttcttcttcagccacagactttcttctgaccgctggagcagtttctagtgtag 20332 Query: 559 accatccttcctcatcggtagtaatttttggtttcaaatgcttgaattttggtttagcat 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20331 accatccttcctcatcggtagtaatttttggtttcaaatgcttgaattttggtttagcat 20272 Query: 619 ggtggtgagaagatcttcttctgaagtgagaanattcttcttcatgtgcttcttggattt 678 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 20271 ggtggtgagaagatcttcttctgaagtgagaaaattcttcttcatgtgcttcttggattt 20212 Query: 679 cttttcactttttcaanttatagcgtggaattcatcaacngtcgaagttt 728 | |||||||||||||| ||||||||| |||||||||||| |||||||||| Sbjct: 20211 c-tttcactttttcaa-ttatagcgttgaattcatcaac-gtcgaagttt 20165 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9578 Number of Sequences: 1807 Number of extensions: 9578 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 975 length of database: 10,358,551 effective HSP length: 16 effective length of query: 959 effective length of database: 10,329,639 effective search space: 9906123801 effective search space used: 9906123801 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)