BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZB04FM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1652 1509 0.0 >3x_Contig1652 Length = 14842 Score = 1509 bits (761), Expect = 0.0 Identities = 804/818 (98%), Gaps = 1/818 (0%) Strand = Plus / Minus Query: 86 taatttcttgacaatttctacatcttgcatagatctcctctacaataccagtcgcagcta 145 ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 11935 taatttcttcacaatttctacg-cttgcatcgatctcctctacaataccagtcgcagcta 11877 Query: 146 ttctgaaacttccagttggatcactgttagcaactatttgaacaccacagaaagtggtat 205 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11876 ttctgaaacttccagttgtatcactgttagcaactatttgaacaccacagaaagtggtat 11817 Query: 206 ttggcgagcacaagggaccatagaaagaagctgtacaataagcatgttctggagtatact 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11816 ttggcgagcacaagggaccatagaaagaagctgtacaataagcatgttctggagtatact 11757 Query: 266 tcaacattctagtcctggttctagagtcactagtggtgtatattggtagagtttggaaac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11756 tcaacattctagtcctggttctagagtcactagtggtgtatattggtagagtttggaaac 11697 Query: 326 gtctccaaccaagagataaaactaaaggatcatttgtcttgagaatctttttgtgccaac 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11696 gtctccaaccaagagataaaactaaaggatcatttgtcttgagaatctttttgtgccaac 11637 Query: 386 gatgtcttctgactcttgcattaataattccgaacttcaattctgtgggaagaagacctc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11636 gatgtcttctgactcttgcattaataattccgaacttcaattctgtgggaagaagacctc 11577 Query: 446 ccataattactggatactttgggttgaaattttcgatgaattccataggaaccttatcga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11576 ccataattactggatactttgggttgaaattttcgatgaattccataggaaccttatcga 11517 Query: 506 agacaatacgaacataagacccagctttcataccttcgatttgttgcctttgttcaggag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11516 agacaatacgaacataagacccagctttcataccttcgatttgttgcctttgttcaggag 11457 Query: 566 tcatagattccagttcggctttattgatttctaattgtttagcaatcttagccttctgta 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11456 tcatagattccagttcggctttattgatttctaattgtttagcaatcttagccttctgta 11397 Query: 626 attcgtaccaggtatcgtattcattttcagggtcttctccaaagttgtctccttcttcca 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11396 attcgtaccaggtatcgtattcattttcagggtcttctccaaagttgtctccttcttcca 11337 Query: 686 tttcgaattgtaaccttaatttctctttttttgcggcattcaattcacgctcttcatcct 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11336 tttcgaattgtaaccttaatttctctttttttgcggcattcaattcacgctcttcatcct 11277 Query: 746 gngtcanatccttcttttcttcttcttcgaaatcagcgaacgattcgttgctatcagatt 805 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11276 gggtcaaatccttcttttcttcttcttcgaaatcagcgaacgattcgttgctatcagatt 11217 Query: 806 cttcatctcctgcagcagaattctcctccttctcatctggggtttcaagctcagctttct 865 ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 11216 cttcatctcctgcagcagaattctcctccttctcatctgtgttttcaggctcagcttcta 11157 Query: 866 agtcctcaaaatcaccgnatacttcatcttcatcatcg 903 ||||||||||||||||| |||||||||||||||||||| Sbjct: 11156 agtcctcaaaatcaccgtatacttcatcttcatcatcg 11119 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7973 Number of Sequences: 1807 Number of extensions: 7973 Number of successful extensions: 80 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)